Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03939 ATGCCGAAAATGGGACTCAAAAACTTGCTCTTCAAAAAAACATCACCATGGCCACCTTCCTCTCCTCCCACAAGGACCTTCTCCGACTCGTTAATGGACGAAAACATTGAAACCGCTCGCGCTATCATTTCCAAATGGGAAATTATTTCCCCTTCTGACCAAACCGCCCCTCTTTTCAGCAACACTCGCCAGGAAGCCAAACAGTACCTTAACGCGGTCATGAGCCTGCAGTCCACTATGCAGCACCTCGTCGCACTGGATTCTTCCTCCGAGAGCCTCGTACAAGCCCAATCCCTAATGCAACTCGCCATGAAGAGGCTCCAGACGGAGTTCTATCGGATATTAGCGGAAAACAGGGACAATCTCGATCCCGAATCCGTCACCTCCACCGATCACCGGAGCAGCAGCGTCTCCGACGACGGCACCGATTTCTCCGACGACGAGTTCCGCTTCGCCGGCCACTCGGTCTCCACGGTCGCCATGGCGGACTTGAAAGCCATTGCGGAGTGTATGGTTTCCGCTGGCTACAGCAAAGAGTGCGTCAAGATTTACATCTTAATGAGAAAGTCCATAGTGGATGAGGCACTGTACCATTTCGGAGTGGAGAGGCTCAGTTTCTCTCAGGTTCAGAAGATGGACTGGGAGGTGCTTGAGTCGAAGATTAAGTCCTGGCTGAACGCTGTCAAGATCGCCGTCCGCACTCTGTTTCACGGGGAGAGAACGCTCTGCGATTACGTCTTCGGTTCGCCGGAGAGGAAGATCGCGGAGTCCTGTTTCGCCGCGGTTTGCAGAGAAGGTGCGGCGTTGCTGTTCGAATTCCCGGCAAAAGTGGCGAAGTGCAAGAAAACGCCGGAGAAAATGTTCAGGACGCTGGATCTGTACGAAGCGATCTCTAACAATCGGCAACAAATCGAGTCCATCTTCTCGTCGGAATCAACCTCCTCCATCAGATCTCAGGTCGCTGTTTCTCAGGCGAGGTTCGGCGAGGCCGTGCGGACTATGCTAATCGACTTCGAATCCGCGATTCAGAAGGAATCCTCGAAGATTCCCGTGCCTGGCGGCGGGATCCACCCGCTCACGCGCTACGTAATGAACTACATAGCGTTCCTCGAAGATTACGGCGACGCGCTAGCGGAGATAGTCGCCGATTGGCCGCAAAATCCGTTGCCGGAGTCTTACTACCGCAGTCCCGATCGCGAGGGAAAGAATCGCTCATCGGAGATAGCTGAACGGATCGCGTGGCTGATATTAGTGCTCCTCTGTAAGCTCGACGGAAAAGCTGAACTGTACAAGGAGGTTGCACTCTCTTACCTATTCCTGGCGAATAACATGCAATACGTCGTCGTAAAGGTCCGCAACTCAAACCTAGGGTTCATCCTCGGGGAGGATTGGTTAACGAAGCACGAATTGAAGGTGAAAGAGTACGTTTCCAAGTACGAGCGCGTGGGGTGGAGCAAGGTTTTCACGTCGCTGCCGGAAAATCCGACGGCGGAGCAAGCTAGGGCGATCTTCGAGGGTTTCAACGTGGCATTCCATGAAGCGTGCAAGGCACAGTCCTCGTGGGTCGTACCCGACCCGAAATTGCGAGAGGAAATAAAAGCGTCAATAGCTTCGAAGCTGGTGCCAAGGTACAGTGAGTTATTCGGGAAGTATCGGGTCGGGGTAGAAAATACTTTCGGGTTTTCACCCGATGATTTGGGAAGTGATATTTCTGAGATTTTATCGGGTAGCATTTCGTCGCATACTCCTTCTCCTCCACATCGCTTCAAACGCCCGTGA 1779 0.5301 MPKMGLKNLLFKKTSPWPPSSPPTRTFSDSLMDENIETARAIISKWEIISPSDQTAPLFSNTRQEAKQYLNAVMSLQSTMQHLVALDSSSESLVQAQSLMQLAMKRLQTEFYRILAENRDNLDPESVTSTDHRSSSVSDDGTDFSDDEFRFAGHSVSTVAMADLKAIAECMVSAGYSKECVKIYILMRKSIVDEALYHFGVERLSFSQVQKMDWEVLESKIKSWLNAVKIAVRTLFHGERTLCDYVFGSPERKIAESCFAAVCREGAALLFEFPAKVAKCKKTPEKMFRTLDLYEAISNNRQQIESIFSSESTSSIRSQVAVSQARFGEAVRTMLIDFESAIQKESSKIPVPGGGIHPLTRYVMNYIAFLEDYGDALAEIVADWPQNPLPESYYRSPDREGKNRSSEIAERIAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVRNSNLGFILGEDWLTKHELKVKEYVSKYERVGWSKVFTSLPENPTAEQARAIFEGFNVAFHEACKAQSSWVVPDPKLREEIKASIASKLVPRYSELFGKYRVGVENTFGFSPDDLGSDISEILSGSISSHTPSPPHRFKRP 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03939 592 PANTHER EXOCYST COMPLEX PROTEIN EXO70 26 567 IPR004140 GO:0000145|GO:0006887
Pumo4g03939 592 Pfam Exo70 exocyst complex subunit 222 570 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo4g03939 592 Gene3D Exocyst complex component Exo70 40 582 - -
Pumo4g03939 592 SUPERFAMILY Cullin repeat-like 59 572 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03939 Pumo-Chr4 80019601 80021981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03939 13 577 EXO70 exocyst subunit family AT5G59730 48.911 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03939 K07195 - gmx:100801773 1021.15