Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03934 ATGATTGATTGGAGAAATATTGGTTTCTTTCTATGTGTTTTATCAATCTTTCCCCTTGTATGCTTTTGTGCTACCTTTGTTCCAGTAGATAATTATCTTATAGACTGTGGAGCACCTGCAAATACTTCAGTAGGTAGCCGCAATTTCGCAGCAGATAATTTTTCCAAGGATCTCCTTTCCACTCAAGAAGATGTTCTTGCCACTACCCCCTTAAAATCAAATACTTCTTCCTCTGATGATTCACCTCTCTATCAAACTGCAAGAGTCTTCACTGGATCCTCAAAGTACACTTTCCATATTAAGCAAAAGGGGAGGCACTGGATCCGTCTCTATTTCTTCCCATTTAGTTATCAAAAATACAATTTGAGTGCTGCAAATTTCACTGTTGCCACCCAAGACCATGTCCTTTTCAGTAGCTCCAACATGCAGGAAGATCCTGTCAAGAAGGAGTACTCAGTCAATGTGACCTCAGACACCCTTGTTATCACCTTTGCCCCTTCAGGCAATTCCATTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGTCCCTGATGACCTAATTGTTGATGATGGTTTTGCCTTAGATCCATCAGTAATCTCTTCTGGGTTGGTGACACAGGCACTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCTACTGTGACCCCTATAAATGACACCCTTCAAAGAACTTGGGTTCCAGATCAAAGTTTCCTTGTGGAACCCAACCTTGCCTCATTTTTTTCTAATATTAAGGGTGTTAAGTATGAGAACCATGGGCAAGCAACAGAAAACACTGCTCCTCCTACTGTTTATGGGACTCTCACACAGATGAACTCAACCGGTGATCCCCGTAATATTTTCAATGTGACATGGCAGTTTGGTGTTAGTCCCGGATTTCAGTACCTTGTTCGACTTCACTTCTGTGATGTAGTCAGTAAAGCACTCAATGAACTCTACTTCAATGCTTATGTTGACTCCAAGCTGGCTGCCTCGAGTGCTGATCCCAGTGTTACTAGCAATAATGCTTTGGGTGTTCCATATTATAGGGATCTGGTTACAGCCGTGGCTGTCAGCAAAACACTTCGCGTAAGTATTGGCCCTTCTGATGTAAATAAGGAGTACCCTAATGCCATTTTGAATGGGCTGGAGATTATGAAAATGAACAATTCTATGGGTAGTCTTATCCAAGGAGCAGGACCTGTGGCTATTACTTCTGGCTCAAGTTCTAAGAAAACAGGCATGATTGTGGGTGTGAGTGTTGGGGTAGTTGGTGCAGTTGTCTTGGCTGGAGTTTTCTTTGTACTATGCAGGAAAAGAAGAAGGTTGGCGCAAAGGCAGTCAAAGACATGGGTTCCTTTATCTATCAATGATGGAACTACTTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTGAGTGCTGCTTCAAACTTTGAGTACCGTGTCCCTTTCGTGGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAGCTGGGTTATTGGGATAGGTGGTTTTGGTAAAGTGTACAAAGGAGAGTTAAGTGATGGCACAAAAGTGGCAGTTAAGAGGGGGAATCCACGGTCCCAGCAGGGGCTTGCAGAATTCCGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTGTCTTTGATTGGTTATTGTGATGAAAGGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTAAAGAGTCATTTATATGGTTCAGGTCTGCCAAGCTTAAGCTGGAAGGAGAGGCTTGAGATATGCATTGGAGCAGCTAGAGGGCTTCATTACCTTCACACTGGCTATGCTAAAGCAGTTATTCACCGCGATGTGAAGTCTGCAAATATCCTACTTGATTTTTTTTTTTGA 1902 0.4259 MIDWRNIGFFLCVLSIFPLVCFCATFVPVDNYLIDCGAPANTSVGSRNFAADNFSKDLLSTQEDVLATTPLKSNTSSSDDSPLYQTARVFTGSSKYTFHIKQKGRHWIRLYFFPFSYQKYNLSAANFTVATQDHVLFSSSNMQEDPVKKEYSVNVTSDTLVITFAPSGNSIAFVNAIEVVSVPDDLIVDDGFALDPSVISSGLVTQALETVWRVNMGGPTVTPINDTLQRTWVPDQSFLVEPNLASFFSNIKGVKYENHGQATENTAPPTVYGTLTQMNSTGDPRNIFNVTWQFGVSPGFQYLVRLHFCDVVSKALNELYFNAYVDSKLAASSADPSVTSNNALGVPYYRDLVTAVAVSKTLRVSIGPSDVNKEYPNAILNGLEIMKMNNSMGSLIQGAGPVAITSGSSSKKTGMIVGVSVGVVGAVVLAGVFFVLCRKRRRLAQRQSKTWVPLSINDGTTSHTMGSKYSNGTTLSAASNFEYRVPFVAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDFFF 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03934 633 Gene3D - 31 183 - -
Pumo4g03934 633 Gene3D - 206 390 - -
Pumo4g03934 633 SUPERFAMILY Protein kinase-like (PK-like) 474 630 IPR011009 -
Pumo4g03934 633 Pfam Malectin-like domain 34 388 IPR024788 -
Pumo4g03934 633 SMART serkin_6 497 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03934 633 Gene3D Transferase(Phosphotransferase) domain 1 573 632 - -
Pumo4g03934 633 Pfam Protein tyrosine and serine/threonine kinase 502 630 IPR001245 GO:0004672|GO:0006468
Pumo4g03934 633 FunFam Receptor-like protein kinase FERONIA 207 390 - -
Pumo4g03934 633 FunFam receptor-like protein kinase FERONIA 461 572 - -
Pumo4g03934 633 ProSiteProfiles Protein kinase domain profile. 497 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03934 633 PANTHER OS03G0124300 PROTEIN-RELATED 11 451 IPR046957 GO:0004672
Pumo4g03934 633 FunFam Putative receptor-like protein kinase 31 183 - -
Pumo4g03934 633 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
Pumo4g03934 633 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Pumo4g03934 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03934 Pumo-Chr4 79928428 79946938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03934 10 630 Receptor kinase-like Gene Family AT3G46290 59.936 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo4g03934 Malectin_like 4.6e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03934 - - gmx:100305416 1138.25