Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03923 ATGGGTTGCTTTCGTTGCACAGGCAAATCAAGCAAAAAATCCAACAACAACAACAACATTAATCACACCGAGAAGCACAGCAATCACACTGCTGCTGATAAGGTCAAAGTTGATTTGAATGTGGATGGTAAAAAAGAAGATAATAATCCTAAGCCTGATCAGCTATCTCTGGACGTGGAAAATTTGAATTTAAAAGAGGTTGCCGATGAAGGAAAAGTTAACGGTCACCGGGCACAGACATTTACTTTTGCTGAGCTTGCATCTGCAACAGGGAATTTCAGGTCAGATTGCTTTCTGGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCACATAGAGAAAATAAATCAGGTTGTAGCAATAAAGCAACTAGACCCTCATGGGCTTCAAGGAATTAGGGAATTTGTTGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATTTGGTCGAGTTAATTGGGTTTTGTGCCGAGGGAGAGCAGAGGCTATTGGTTTACGAGTACATGCCATTGGGATCTTTGGAGAATCATTTGCACGATCTTCCGCGTGGTAGAAAACCGATTGATTGGAATACAAGAATGAAAATAGCAGCTGGTGCAGCTAGAGGTTTAGAGTATTTGCATCATAAAATGAAACCTCCTGTCATATACCGGGACCTGAAATGCTCCAATATTCTGTTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTAGGACCAAGTGGTGATAAAACCCATGTTTCAACAAGAGTTATGGGAACATATGGATATTGTGCCCCAGATTATGCAATGACGGGTCAATTGACGTTCAAGTCTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAGATCATCACAGGCAGGAAGGCGATTGACTATACAAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGTATGTCAAAGATCTTTTACCAAGTTGGAATCCATATCTGTTGTGATGTTGCTACACATATCTGTTGTCAATGCATTTGATAAACTTGAATACTCAAATTAG 1035 0.4068 MGCFRCTGKSSKKSNNNNNINHTEKHSNHTAADKVKVDLNVDGKKEDNNPKPDQLSLDVENLNLKEVADEGKVNGHRAQTFTFAELASATGNFRSDCFLGEGGFGKVYKGHIEKINQVVAIKQLDPHGLQGIREFVVEVLTLSLADHPNLVELIGFCAEGEQRLLVYEYMPLGSLENHLHDLPRGRKPIDWNTRMKIAAGAARGLEYLHHKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDVYSFGVVLLEIITGRKAIDYTKPAKEQNLVAWVCQRSFTKLESISVVMLLHISVVNAFDKLEYSN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03923 344 SUPERFAMILY Protein kinase-like (PK-like) 79 322 IPR011009 -
Pumo4g03923 344 Gene3D Phosphorylase Kinase; domain 1 64 169 - -
Pumo4g03923 344 MobiDBLite consensus disorder prediction 1 33 - -
Pumo4g03923 344 Pfam Protein tyrosine and serine/threonine kinase 98 300 IPR001245 GO:0004672|GO:0006468
Pumo4g03923 344 FunFam probable serine/threonine-protein kinase RLCKVII 65 169 - -
Pumo4g03923 344 MobiDBLite consensus disorder prediction 8 25 - -
Pumo4g03923 344 SMART serkin_6 93 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03923 344 Gene3D Transferase(Phosphotransferase) domain 1 170 332 - -
Pumo4g03923 344 ProSiteProfiles Protein kinase domain profile. 93 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03923 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Pumo4g03923 344 FunFam Serine/threonine-protein kinase PBS1 170 328 - -
Pumo4g03923 344 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Pumo4g03923 344 PANTHER OS07G0668900 PROTEIN 3 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03923 Pumo-Chr4 79831678 79835514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03923 1 312 Glycoside Hydrolase AT3G07070 57.692 6.58e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo4g03923 PK_Tyr_Ser-Thr 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03923 - - gmx:100794680 582.793