Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03910 ATGTTCCCAGTTGGTTTATATTCCCATTGGTGTATTCTCTGTCTGCACAATGACTCAGACTCCTGTGATTTTCTTTTTCAGATTGAAAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAACATGTAAGAACCAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGTAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACAGACTTGGAGGCAACGTTGGAAGCTGGGATTAGGCACCGGAACAAGGCTCTAGCTTCTGTTGCAGACCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGTCCTCTGTTTGCAAAAACACAGATGCAGGAGGCGCTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTAGGAGCATTGGTTCTTATAGCACGTGAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTAATGGCACTATTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTGCATCAGCTTACAAATGCCGCGATAGTTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGATCCATACCCGTTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCAGAATTGTCTTTCCTGAACTCTATGAAGATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAACTTAGGAATTGTAATGAGTTATTTTAATGCTCATTTCTTTGGAAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTATTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACAGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTAGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAGTTATGGTATACTGAATACCTCTGAGGTGGATCTTGAGGCTGAGCCTGATTCTGCCAGACAACATCATCATGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCATGCCATTGAATTTGTTCTAGGTTCAGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTTGTTATTCGGTTGGTGGGGCTAACCGTTTTTGCCTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGACGATTGA 1836 0.4052 MFPVGLYSHWCILCLHNDSDSCDFLFQIEKTVFVVFFSGEHVRTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLEAGIRHRNKALASVADHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLFAKTQMQEALQRATFDSNSQVGIIFHPMDAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELSFLNSMKMKMSILFGVAHMNLGIVMSYFNAHFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEVDLEAEPDSARQHHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03910 611 PANTHER VACUOLAR PROTON ATPASES 27 610 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo4g03910 611 Pfam V-type ATPase 116kDa subunit family 27 603 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03910 Pumo-Chr4 79593800 79599966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03910 28 604 Primary Pumps ATPases(2) AT2G28520 82.729 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03910 K02154 - gmx:100776037 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03910 4 79593800 79599966 Pumo4g03910 4 79593800 79599966 ECH
Pumo4g03910 4 79593800 79599966 Pumo11g01515 11 46072934 46082559 PCT