Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03909 ATGGAGCAGTTCATCGATAACTTGCAGCCGATGGATCTGATGCGATCCGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGTCGAGTCCGCGCACCGCGCCATCTCCTATTTAGGCGAACTCGGCCTTCTCCAATTCCTGCGACGTAAGTTCTCTTCCAGATCCAACCTCGCTTCCTCTAGATTCCGATTTTTCTTCGCTTCTTTTCTTCTTCGATTTCGTGTTTTAGGTTTAAATGCCGATAAAAGCCCCTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGCCTAATGTCTTCTTCTCGTACTGTATTGCAACCAGATATAGACTTGGAGGATTTAGAGATACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGACAAACTTCGGCAATCATATAATGAACTCCTGGAATTCAAGATTGTATTACAAAAGGCATGTGGTTTTCTTGTTTCAAGTCATAGCCTTGTGGTTTCAGATGAAAGAGAACTACAAGAGAATGTATATTCAAATGATGCCTATGTTGAGACAGCATCTTTGCTTGAACAGGAAGTGAGGCCTCAGTCATCAAACTCGTCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACGAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATCATGGATCCTGTTTCCTGCTGA 792 0.4179 MEQFIDNLQPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFLRRKFSSRSNLASSRFRFFFASFLLRFRVLGLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHSLVVSDERELQENVYSNDAYVETASLLEQEVRPQSSNSSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSC 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03909 263 Pfam V-type ATPase 116kDa subunit family 77 261 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo4g03909 263 PANTHER VACUOLAR PROTON ATPASES 13 262 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pumo4g03909 263 Coils Coil 129 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03909 Pumo-Chr4 79590380 79593699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03909 1 260 Primary Pumps ATPases(2) AT2G28520 66.538 2.07e-113 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03909 K02154 - gmx:100793301 416.001