Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03850 ATGTGCAAGACAAAGATGGCAACCAACGCGGCCAGTCCCACTCGAACCCCTCGATCCGAACGACGCGCCACCCAAAGCCCAAGGACACCCTCCTCCAGGCCCACACTCAGGCCCACTCCGGAGCCCAGTTCTTTATCCGACAGACCCTCCACCTCATACGGCACCAACAGCACCAGCAGCGCTCCCTACAGCGGCTCCACCGGCTACCGACTCTCCTCCGACACCTCCGTCTCAAGCTTCTCCTCCCTCACCTCCCTCCGCGACACGCTTCCCGAAAACCCTCACATCTACGACTTCTCCGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCCTGCTGGCGCTGCACCCTCCGCGGCGCCAACGTCATTGTCTTCCAGCGCAAGTTCCGCCGCAAACTCCAGACGAACCAGCTCCAGCAGCTCCTCTCCGTTGTCTGCCGCAGCCACCACGTCAGCTTCATCAAACTCCTCGGCGCCTGCGTCTCCGGCGACCACATCTACCTCGTCTACGAGTTCGTCAACGGCGCCAGCCTCGCCGACTGCCTCCGCAGCAAAATAAACGCACACTTCACCGTGCTCTCCACGTGGATGTCCAGAATGCAGGTGGCCACGGATCTCGCTCACGGCCTCGATTACATTCATAACAAAACCGGTTTGAACATCAATTTCGTGCACAACCACATCAAGAGCAGCGGAATCATCGTCACCGAGCCTTCCTTCAACGCTAGGGTTTGCCATTTCGGCGCCGCGCAGCTCTGCGGCGAAATCGAGCTCGAAAACGAGAAATTAGGCGAGATTAGTGAAATCGAGGAGAAATTAACATCGTCGCCGGCGAGATCCAAGCAATTCGAGGGGGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTGGCGACTCAGAAGTCTGATATATACGCCTTCGGAGTGGTGATGTTGGAGCTCTTGTCCGGGGAAGAGCCGTTGAAGTTCAAGTTCGACGAGAAGACGCGCGGGTTTGTGAGGACGTCGGTGATCGAAGCGGCGAGGGCCGCCGTGGACGGCGGCGAAGGTAGCGTGGAAGGGAAGCTGAGGAAGTGGGTGGATCGGAGATTGAAAGATTCTTTCCCTGTTGATGTAGCGGAGAAGTTGACACGTGTCGCGCTGGAGTGCGTACACGTGGATCCAGATAAAAGACCCAACATGGGACGCGTCGCTGGCAAGATCTCCAAGTTTTATTTGGCGTCGAGGATCTGGTCAGATAGTATTAAGATGCCTGATATTACTGTTACGTTGGGGCCTCGATGA 1314 0.5791 MCKTKMATNAASPTRTPRSERRATQSPRTPSSRPTLRPTPEPSSLSDRPSTSYGTNSTSSAPYSGSTGYRLSSDTSVSSFSSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGANVIVFQRKFRRKLQTNQLQQLLSVVCRSHHVSFIKLLGACVSGDHIYLVYEFVNGASLADCLRSKINAHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGEIELENEKLGEISEIEEKLTSSPARSKQFEGVRGYMAPEFQASGVATQKSDIYAFGVVMLELLSGEEPLKFKFDEKTRGFVRTSVIEAARAAVDGGEGSVEGKLRKWVDRRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLASRIWSDSIKMPDITVTLGPR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03850 437 PANTHER OS09G0572100 PROTEIN 1 437 - -
Pumo4g03850 437 MobiDBLite consensus disorder prediction 1 68 - -
Pumo4g03850 437 SUPERFAMILY Protein kinase-like (PK-like) 91 407 IPR011009 -
Pumo4g03850 437 ProSiteProfiles Protein kinase domain profile. 69 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03850 437 Gene3D Phosphorylase Kinase; domain 1 72 180 - -
Pumo4g03850 437 Pfam Protein kinase domain 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03850 437 Gene3D Transferase(Phosphotransferase) domain 1 182 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03850 Pumo-Chr4 78788864 78790929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03850 92 425 Receptor kinase-like Gene Family AT1G51940 32.249 2.14e-42 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo4g03850 Pkinase 3.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03850 - - gmx:100792694 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03850 4 78788864 78790929 Pumo4g03850 4 78788864 78790929 ECH