Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03847 ATGGGTGCAGTCTGTGACCTATTGGGTCCACGCTATGGCTGCGCCTTCCTCATCATGCTCTCGGCCCCTACCGTGTTCTGCATGTCCTTTGTGAAAGATGCTGCCAGGTACATAGTGGTTCGGTTCTTGATTGGGTTCTCCTTGGCCACGTTTGTGTCGTGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATTGTAGGGCTTGCAAATGGGACTGCTGCGGGGTGGGGGAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCGTTGGTGTATGAAGTTATCAGAAGAGCTGGGGCTACTCCCTTCACTGCTTGGAGGATTGCCTTCTTTGTTCCCGGTTGGTTGCATGTCATCATGGGGATCCTGGTCCTTACTCTAGGCCAGGACTTGCCTGATGGAAACCTTGGGGCCTTGCAGAAGAAGGGTCATGTAGCTAAAGACAAGTTTTCCAAGGTGCTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTCCTCTATGGGTACTCAATGGGAGTTGAATTGACAACTGACAATGTCATTGCTGAGTATTTCTATGACAGATTTAATCTAAAGCTGCACACTGCTGGAGTCATTGCTGCTTCATTTGGAATGGCAAACTTGGTTGCTCGACCCTTTGGCGGATATGCTTCTGATGTTGCAGCCAGGTTGTTTGGCATGAGGGGAAGACTCTGGACCCTTTGGATCCTCCAAACCTTAGGAGGGGTTTTCTGTATTTGGCTTGGCCGTGCCAATTCTCTTCCTATTGCCATCGTGGCTATGATCCTGTTCTCTATAGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATCATTCCTTTCATCTCAAGGAGGTCTTTGGGGATTATTTCAGGACTCACTGGTGCAGGTGGAAACTTTGGGTCTGGCCTGACCCAATTGGTCTTCTTTTCAACCTCCAAATTCTCCACTGCCACAGGTCTCTCCTTGATGGGTGTGATGATAGTGGCTTGCACTCTTCCTGTGGGTCTTGTTCACTTCCCACAGTGGGGTGGCATGTTCCTACCCCCCTCAAAAGATGTCAACAAATCCACTGAAGAATTCTATTACACCTCTGAATGGAATGAGGAAGAAAGACAGAAGGGCTTGCACCAGCAAAGTCTCAAGTTTGCAGAGAATAGCCGATCCGAGAGAGGAAAACGTGTGGCATCAGCCCCAACACCCCCAAATGCAACTCCCACTCATGTCTAG 1242 0.4936 MGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAARYIVVRFLIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYEVIRRAGATPFTAWRIAFFVPGWLHVIMGILVLTLGQDLPDGNLGALQKKGHVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGVIAASFGMANLVARPFGGYASDVAARLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTATGLSLMGVMIVACTLPVGLVHFPQWGGMFLPPSKDVNKSTEEFYYTSEWNEEERQKGLHQQSLKFAENSRSERGKRVASAPTPPNATPTHV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03847 413 Gene3D MFS general substrate transporter like domains 147 346 IPR036259 -
Pumo4g03847 413 CDD MFS_NRT2_like 1 341 IPR044772 GO:0015112
Pumo4g03847 413 FunFam Nitrate transporter 2.1 148 349 - -
Pumo4g03847 413 SUPERFAMILY MFS general substrate transporter 1 342 IPR036259 -
Pumo4g03847 413 Gene3D MFS general substrate transporter like domains 1 136 IPR036259 -
Pumo4g03847 413 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 341 IPR020846 GO:0022857
Pumo4g03847 413 MobiDBLite consensus disorder prediction 373 413 - -
Pumo4g03847 413 Pfam Major Facilitator Superfamily 1 308 IPR011701 GO:0022857|GO:0055085
Pumo4g03847 413 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 399 IPR044772 GO:0015112
Pumo4g03847 413 MobiDBLite consensus disorder prediction 373 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03847 Pumo-Chr4 78747090 78748902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03847 1 413 Inorganic Solute Cotransporters AT5G60770 80.630 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03847 K02575 - gmx:100782969 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03847 4 78747090 78748902 Pumo4g03847 4 78747090 78748902 ECH