Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03819 ATGGCCAAGGGCACCGATTCCGACGAGTTCGTGGTGCTTTCTAGGGTTCGTACGGGTCTCAAGAGGGAGTTCGCATTCGCCATGAAGGCCCAATCTGAGATCTGCGGCGCTTCTCTGGGCCGAACGCGGGCCAGCAAGAACCGGGTTGAGGCGCCGGTTCAGACCGCCGCCTCGGCCCGGAAAAGGTCGAGGAAGTCCGAGGAGCCGAAAACCTCGGAGGATGCTATGAGCGAGGAAGAGGTCAAGAGCGACGTGGTGGATCTTCAGAGCGATGATGAACCGAAGAATAATAATAATAATAATCACGTGGGAGAATCAGAATCTGCGGCAATGCAGGTTTGTGAAGAGGAACCGAAGAGTGACGTGGTGGTAGAGGCTGTTATTATCAGCGAAGAGGAACCGAAGGTGGTGGAACCTGAACCTGTTATCAGCGAAGAGGAACCCAAGGTGTTGGATGATGTTATCAATGAAGAGGAACCTGTTGTGGCTGAGACGTTGAAGGAAGAGGAAAATATTGTGGCTGAGACATTGAAGGAAGAGGTTGTGGATGAAATGTTACAACAACCCCTTTGTAAAGAGGAACCGGAGAAGGGTGTTTCGGAGGAGAAAGATTCTAATGGGGCAACCCTAGTTTTGGTCAATGATGATGATAAGGGGAAGAAGAAGAGAATGAAAAAGCGGTTGGAGAGGCCTCAGCTGGAGAGAAGGTTTACGCGGTCGGCATTGAAGGTAAAATCCGAGGAAACAAATGATGGGGAACATGTTGGTGTGGCTGGAATTGATGATGGTGTTAAGAGGGAAACTGAAACTGAGGCTTCGTTGTTGATGACTACTCCTAGTTCGGTAAAATTTTCGAATTCTAGGTTGAAGAAGTTTCCTGCCAAGTTGAAGGATCTTCTGTCTACGGGGATTCTTGAGGGGCTGCCAGTGATGTACATGAAGGGGGCGAAGACACGTTGGAAGCCTGGAGAAAAGGGGCTTCAAGGAGTGATTCGAGACTGTGGTGTTTTGTGCTTTTGTGAGATTTGTAAGGGGGTTGAGGTTGTCACGCCCACTGTGTTTGAGCTGCATGCTGGCAGTGCAAACAAGCGACCCCCTGAGTATATTTACATCCATGATGGGAATAGTGGAAAAACCCTACGCGATATCATGAATGCCTGCTGCTGCTGTGATTTGCCCTTGGAGTCCATGGATGAAGCCGTCCAAAAGCTCCTTGGTGACTTCACTATGAAGAAATCTTCCATCTGTTTGAACTGCAGAGGAGCATGCAAGGGTTTGTCAAGGCTAGTATGTGATTCGTGCTTAGCAAGCCCCTCTCAAACAGCTGTGGGTAGCAGCAAAAGAATTTCACAACCAGTTCAACCCAGATCACCAGAACCAGTTGTGATTCAAAAATCATCAGACAATGAGATGCAGCCAAATTCATTAGACAATGAGATGCTGCCAAATTCATTAGTACACTGGGATGCAGCCAAATTCATTAGATAA 1488 0.4832 MAKGTDSDEFVVLSRVRTGLKREFAFAMKAQSEICGASLGRTRASKNRVEAPVQTAASARKRSRKSEEPKTSEDAMSEEEVKSDVVDLQSDDEPKNNNNNNHVGESESAAMQVCEEEPKSDVVVEAVIISEEEPKVVEPEPVISEEEPKVLDDVINEEEPVVAETLKEEENIVAETLKEEVVDEMLQQPLCKEEPEKGVSEEKDSNGATLVLVNDDDKGKKKRMKKRLERPQLERRFTRSALKVKSEETNDGEHVGVAGIDDGVKRETETEASLLMTTPSSVKFSNSRLKKFPAKLKDLLSTGILEGLPVMYMKGAKTRWKPGEKGLQGVIRDCGVLCFCEICKGVEVVTPTVFELHAGSANKRPPEYIYIHDGNSGKTLRDIMNACCCCDLPLESMDEAVQKLLGDFTMKKSSICLNCRGACKGLSRLVCDSCLASPSQTAVGSSKRISQPVQPRSPEPVVIQKSSDNEMQPNSLDNEMLPNSLVHWDAAKFIR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03819 495 MobiDBLite consensus disorder prediction 60 91 - -
Pumo4g03819 495 MobiDBLite consensus disorder prediction 192 227 - -
Pumo4g03819 495 MobiDBLite consensus disorder prediction 37 109 - -
Pumo4g03819 495 MobiDBLite consensus disorder prediction 92 107 - -
Pumo4g03819 495 PANTHER AUTOIMMUNE REGULATOR 56 472 - -
Pumo4g03819 495 Pfam Tify domain binding domain 329 387 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03819 Pumo-Chr4 78424984 78427149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03819 293 456 PHD Transcription Factor Family AT2G36720 29.944 1.67e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03819 - - gmx:100803825 765.377