Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03805 ATGCACATGATTCCTTCACTCTGCTTCGCCGGTGCAAGATCTCCGGTACATCTCCGGCAGGCGCTGAAAGCGGTGAAATGCCTCAGCAGATCTACGGAGGAGAAGCAGTGGAGCGACGCTGAAACCGCCGTATCCGACTCCGACGAAGTTGCTGATGAACCGAATGACCAGAACCGAACTTCCGTTCCGGAAAACGGTCGTGTTGAGTCGCAGAGGATTGCCACCACGTCTTCCGGCGATTCTCTCTCTCTCGGAATTCGAGAACCGGTTTATGAAGTTGTTGAAGTGAGGTCTAATGGGAAAGTATCAACTAGAAAAATCAACAGGAGACAGTTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAACTGTGGATCCTTCATTGTTTATGACGAATTCAATGCCTGCTTTGCTGGTTCGGGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATCGTATAGGAGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAGCAGAGTTTGATGCACTTAGAACCTCGTGTACAAGCTCTTCTTGAGGCATTGCCAAATCGGTTAACTGGTGACATATTGGAGCAGCTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAAAGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAGGATCCCCATGAAATACGCCGTATATGTATCATGGGAAGAAACTGCACACTTAGTAAAGGAAACAATGATATGGAATGCTCAGTGCCTTTTGAAAAGCAGATTGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGCCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGTTCACGAAGGCTTGAGGTTAGCAGAGTAGAACTGCTTCTGCAGGTTGGAACATTCTGTGTGGCAATAGGTGCTCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTTGCATTTTGGCTGACAACAGCAGGGATAATTGTTGGTGCCATTATTGGTTTCTTTCTGATGTATTCCTACCTCAGGGCAAGGAAAATATTTTGA 1263 0.4497 MHMIPSLCFAGARSPVHLRQALKAVKCLSRSTEEKQWSDAETAVSDSDEVADEPNDQNRTSVPENGRVESQRIATTSSGDSLSLGIREPVYEVVEVRSNGKVSTRKINRRQLLKSSGLRPRDIRTVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQSLMHLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLSKGNNDMECSVPFEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAIIGFFLMYSYLRARKIF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03805 420 Gene3D - 86 167 - -
Pumo4g03805 420 Coils Coil 300 320 - -
Pumo4g03805 420 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 59 419 IPR039204 -
Pumo4g03805 420 MobiDBLite consensus disorder prediction 35 81 - -
Pumo4g03805 420 FunFam Magnesium transporter MRS2-11, chloroplastic 86 167 - -
Pumo4g03805 420 FunFam Magnesium transporter MRS2-11, chloroplastic 169 351 - -
Pumo4g03805 420 CDD Mrs2_Mfm1p-like 93 419 IPR039204 -
Pumo4g03805 420 Gene3D Magnesium transport protein CorA, transmembrane region 169 351 - -
Pumo4g03805 420 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 356 410 IPR045863 -
Pumo4g03805 420 MobiDBLite consensus disorder prediction 56 81 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03805 84 420 MRS2 Gene Family AT5G22830 83.086 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03805 K16075 - gmx:100808371 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03805 4 78209405 78217315 Pumo4g03805 4 78209405 78217315 ECH