Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03782 ATGAGATTGGAGAAATGCTGGTTTTGCTCTTCGACCATATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCGAAGATTTTTCGGTTTTGTAGATCGAAATGCCACAAGAACTTTAAAATGAAGAGAAATCCTCGTAAGGTAAAATGGACCAAGGCATATCGTCGAGTGCATGGAAAGGATATGACACAGGACTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAAAGATATGACAGGAATCTTGCAGAGAATGTCCTCAAGGCCATTCCTAAGATTGATAAGATCAGAGTCACCAGGGAGGAGAGGCACCATAAGAATAGGATGAAAGGCAAAAAGGAAAAGCTCCAGAAGGAGGCAGCGAGGGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTCTGTGCTTCAACAGGATCCATCTCTCACTTTACCAAAGATCAAAGTCAAGGTTTCCCAACAGCAATCAGAGGAGAATCATGCCATGGAAGAGTAA 507 0.4379 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLQKEAARELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03782 168 Coils Coil 109 129 - -
Pumo4g03782 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Pumo4g03782 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Pumo4g03782 168 SMART 4TRASH 6 44 IPR011017 -
Pumo4g03782 168 MobiDBLite consensus disorder prediction 102 168 - -
Pumo4g03782 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Pumo4g03782 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Pumo4g03782 168 MobiDBLite consensus disorder prediction 135 160 - -
Pumo4g03782 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Pumo4g03782 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 167 IPR000988 -
Pumo4g03782 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03782 Pumo-Chr4 77899120 77901015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03782 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.452 8.02e-82 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03782 4 77899120 77901015 Pumo4g03782 4 77899120 77901015 ECH