Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03776 ATGGACCCATGGCTCGACGATCTAACCGACGACCTCCAGAGTCTTAGCTTCGCCTCCACCGCCACCGCGGACATCAAGCGAAGCACCAGCTTCGGCTCCGAAACCACCACTCTCACTGCCTCGTCCTCCGCCCACCTCCCAGCCAACAACAAGCCCCACGCGCCCTCCGCGGACCCCCGCTGGGCTGCCATCCACCGGATCCGATCAGAGTCCCCCAGCCGCCGCATCCTCCCCTCCGACCTCCGCTTCTGCCGCCGCCTTGGTTCCGGCGACATCAGCTCCGTCTACCTCGCCGAACTCAACGACGGCTCCCTCTCCGTCATGTTCGCCGCCAAGGTCATGGACAAGAAGGAGCTCGCCAGCCGCAGCAAGGAGGGAAGAGCCAAAACCGAAAGAGAAATCCTGGAATTGCTCGACCACCCCTTCCTCCCCACCCTCTACGCCACCATCGACGCCGCCAAATGGCTCTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGCCAACGCCAGCCCCACAAACGCTTCCCCGAACCCGCCGTCAGGTTCTACGCGTCAGAGGTGCTAGTGGCACTTGAATACCTTCACATGATGGGGATAGTGTACCGTGATCTGAAGCCGGAGAACGTGTTAGTTCGATCAGACGGCCACATCATGCTCACTGATTTTGACCTCTCGTTAAAATGTGATGATTCCACATCAACGCCCCAGATCATCTTGGATCAGAAAAACACCCCTCGCATGGGCCCAAAGGTGGAACCCTCTCAGTTCACCTCGTCTTCGTGCATAATACCCAACTGTATAGTCCCCGCGGTGTCGTGTTTCCACCCAAAACGCAAGCGGAAGAAGAAGCAAAGCCAACACAATGGGCCTGAGTTTGTAGCCGAGCCCATTGATGTCCGGTCCATGTCGTTCGTTGGGACCCACGAGTACTTGGCTCCGGAAATCGTGTCCGGGGAGGGCCACGGTAGTGCCGTGGACTGGTGGACTTTGGGCATATTTATATTTGAATTGTTCTATGGTGTGACACCTTTTAGGGGAATGGACAATGAGCTAACCCTAGCAAACATTGTGGCTCGAGCCTTGGAGTTCCCAAAGGAACCCACCGTGCCATCCACGGCAAAAGACCTCATCTCTCAGTTATTGGTTAAGGACCCTTCAAGGAGGCTAGGGTCAACAATGGGGGCTTCCGCCATCAAGCACCACCCCTTTTTTCAATGGTGTTAA 1239 0.5747 MDPWLDDLTDDLQSLSFASTATADIKRSTSFGSETTTLTASSSAHLPANNKPHAPSADPRWAAIHRIRSESPSRRILPSDLRFCRRLGSGDISSVYLAELNDGSLSVMFAAKVMDKKELASRSKEGRAKTEREILELLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQPHKRFPEPAVRFYASEVLVALEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIILDQKNTPRMGPKVEPSQFTSSSCIIPNCIVPAVSCFHPKRKRKKKQSQHNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPTVPSTAKDLISQLLVKDPSRRLGSTMGASAIKHHPFFQWC 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03776 412 FunFam serine/threonine-protein kinase D6PK-like 167 234 - -
Pumo4g03776 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pumo4g03776 412 MobiDBLite consensus disorder prediction 36 59 - -
Pumo4g03776 412 SMART serkin_6 81 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03776 412 FunFam - 306 348 - -
Pumo4g03776 412 Gene3D Phosphorylase Kinase; domain 1 80 166 - -
Pumo4g03776 412 PANTHER FLIPPASE KINASE 1-RELATED 30 410 - -
Pumo4g03776 412 SUPERFAMILY Protein kinase-like (PK-like) 62 410 IPR011009 -
Pumo4g03776 412 Pfam Protein kinase domain 306 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03776 412 Pfam Protein kinase domain 84 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03776 412 FunFam serine/threonine-protein kinase D6PKL2 80 166 - -
Pumo4g03776 412 Gene3D Transferase(Phosphotransferase) domain 1 305 410 - -
Pumo4g03776 412 ProSiteProfiles Protein kinase domain profile. 81 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03776 412 Gene3D Transferase(Phosphotransferase) domain 1 167 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03776 Pumo-Chr4 77780179 77784601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03776 1 410 AGC Kinase Gene Family AT3G44610 68.545 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo4g03776 Pkinase 4.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03776 K08286 - gmx:100792738 788.875