Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03774 ATGAAGGTCGTCGCTGCTTACTTGCTCGCAGTATTGGGAGGGAATCCATCCCCTTCTACCAGTGATATCAAAAACATCCTTGGCGCAGTTGGTGCTGATGCTGAGGTGGAGTTGATTGAGATGCTCTTGACTGAAGTCAAGGGCAAAGACTTCAATGAACTACTTGCTAGTGGAAGAGAAAAGATGTGTGCAGGGTCTTCTGGCGGTGCTGCGGTTGCTGTTGCTGCTGCACCAGCGGGAGGTGCTGCTGGTGGTGCTGCACCTGCTGCCGAAGCAAAAGAAGAAAAGAAAGTAGAGGAGAAGGAGGAGTCTGATGATGACATGGGTTTCAGTTTGTTCGACTAG 345 0.5043 MKVVAAYLLAVLGGNPSPSTSDIKNILGAVGADAEVELIEMLLTEVKGKDFNELLASGREKMCAGSSGGAAVAVAAAPAGGAAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03774 114 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pumo4g03774 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pumo4g03774 114 Gene3D - 1 59 IPR038716 -
Pumo4g03774 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pumo4g03774 114 Pfam 60s Acidic ribosomal protein 17 113 - -
Pumo4g03774 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pumo4g03774 114 MobiDBLite consensus disorder prediction 81 114 - -
Pumo4g03774 114 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03774 Pumo-Chr4 77765291 77766635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03774 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 61.404 2.08e-27 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03774 K02943 - gmx:100791682 132.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03774 4 77765291 77766635 Pumo4g03774 4 77765291 77766635 ECH