Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03760 ATGAAAAGAGTAAAACAACATCTTAAATTGTTGACACAAATCCCCCTGGCTCAGACACAGAAAATCAGCAGATGTTTCTGTCAGGGCACTCAACTTTCTCCAAACCATAATGATTCATCAGATGATTTTCCTGTGGTTTCACCAAGAATCAAACTCAGAGATGGGAGACACCTTGCCTATATTGAGAGAGGCGTCCCCAAAGACAAGGCAAAATACAAGGTCATCATTGTGCACGGCTTTGGAAGCTCAAAAGAGATGAATTTTCTGGCACCCGAAGAATTAATAGATGATTTGGGTATATATCTTCTGCAATATGACCGGGCTGGATACGGAGAAAGTGATCCAAACCCCAAACGCTCATTGAAGAGTGAAGCACTTGACATTCAAGAGCTTGCTGATCAGTTAGAATTAGGACCACAGTTTTATGTGATTGGAGTCTCAATGGGTTCATATGCCACTTGGAGTTGTCTAAAGTATTTGCCCCACAGACTTGCAGGGTTGGCACTGATAGCCCCAGTGATCAATTACAGGTGGCCTTCATTCCCTAAGAGTTTGATAAGGGAGGACTACAGGAGGAAACTTGTCCATTGGTCTATGTGGCTTGCAAACCACTGGCCTAGACTATTGCATTGGTGGGTCACTCAAAAGTGGCTCCCTTCAACTGCTGTCATAGAAAAGAACCCTGCATTTTTCAACAAAAGTGATGTGGATATTCTGAAGACAATTCCTGGGTTCCCTATGCTTACCAAGGACAGTTTAAGTGAACAGGTTGTTTTTGACACTCTTCGGCATGATTGGAGGGTGGCTTTTGGAAAATGGGAATTTGACCCAATGAAGCTAAGTAATCCATTCCCTCACAATACAATTTCTGAGACAAAAGCTGTTGCTTATGGCAGGTTGTTCCAAGAATTAGCACCTTTATCAACACACATGGCTCTCCAACAACCAAATCAAGAGGTGCCGTTGCAAGAGCCAGAAGCCACATTTTCTCAACTGAGCAGACAAAACTCAATACTCTCACTCACCCTTGATGAGTTCTATTGCAAGAATGGAAAGAGCTTAGGGTCCATGAACATGGATGAATTCCTTGCCAGCATTTGGAACTCAGATGACAACCAAGTTAACCCACCACTCCCCACCCTTGATGAAGCTGCAAAGGGTAAAAGTGTAGCAACAGAACCCACCATTTCCCAGCCAGGCTCATTCTCTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTCTGGTCTCAGATCCACAAAAGCCAACCACAGCACAATGAAGCTAATAATAGCCTTGTCATGAATGAGCCACTCAAAAGGCAACACACACTTGGAGAAATGACTTTGGAGGATTTCCTAGTAAAAGCTGGGGTGGTGCAAGAATCATCACCACTATTCAACTCTTCATTACCTCAGGATAAGATTGGTAACATTGCAAGTAAGGGACCATTGGATGCTAGTTACAGATTAAGGCCTGAAACACAACAAATGTTGGCACAGAATGACAACTTAGTTGTAAAGGATCTCACTACAAGTGGTGCTGTGGAGAAATGTCCAAGCTTAGGAGAATCAAGTGGGAAGGGCAATAGGAAGAGGATCATTGATGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCTGCAGCACGTTCTCGAGCAAGAAGACAGGCATATACTGTAGAGCTAGAAGCAGAGTTGAATCTGCTGAAAGAAGAGAACGAAAAGCTCAAACAAACTCTGGCCGAAGCTGAACGCAAGAGAAAACAAGAGATTTCTCAGAGAAAGCACACAACAATGGCTCAAAAGAGGACAGAAAAATTGAGGGCAATGAGGAGGCCTCTAAGCGCATCATGGTGA 1887 0.4372 MKRVKQHLKLLTQIPLAQTQKISRCFCQGTQLSPNHNDSSDDFPVVSPRIKLRDGRHLAYIERGVPKDKAKYKVIIVHGFGSSKEMNFLAPEELIDDLGIYLLQYDRAGYGESDPNPKRSLKSEALDIQELADQLELGPQFYVIGVSMGSYATWSCLKYLPHRLAGLALIAPVINYRWPSFPKSLIREDYRRKLVHWSMWLANHWPRLLHWWVTQKWLPSTAVIEKNPAFFNKSDVDILKTIPGFPMLTKDSLSEQVVFDTLRHDWRVAFGKWEFDPMKLSNPFPHNTISETKAVAYGRLFQELAPLSTHMALQQPNQEVPLQEPEATFSQLSRQNSILSLTLDEFYCKNGKSLGSMNMDEFLASIWNSDDNQVNPPLPTLDEAAKGKSVATEPTISQPGSFSVPPPICKKTVDEVWSQIHKSQPQHNEANNSLVMNEPLKRQHTLGEMTLEDFLVKAGVVQESSPLFNSSLPQDKIGNIASKGPLDASYRLRPETQQMLAQNDNLVVKDLTTSGAVEKCPSLGESSGKGNRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKQTLAEAERKRKQEISQRKHTTMAQKRTEKLRAMRRPLSASW 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03760 628 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 13 376 - -
Pumo4g03760 628 Gene3D alpha/beta hydrolase 46 284 IPR029058 -
Pumo4g03760 628 Coils Coil 565 603 - -
Pumo4g03760 628 MobiDBLite consensus disorder prediction 590 620 - -
Pumo4g03760 628 Gene3D - 544 600 - -
Pumo4g03760 628 Pfam bZIP transcription factor 546 598 IPR004827 GO:0003700|GO:0006355
Pumo4g03760 628 MobiDBLite consensus disorder prediction 590 628 - -
Pumo4g03760 628 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 549 564 IPR004827 GO:0003700|GO:0006355
Pumo4g03760 628 SUPERFAMILY Leucine zipper domain 546 595 IPR046347 GO:0003700|GO:0006355
Pumo4g03760 628 SMART brlzneu 542 606 IPR004827 GO:0003700|GO:0006355
Pumo4g03760 628 SUPERFAMILY alpha/beta-Hydrolases 42 211 IPR029058 -
Pumo4g03760 628 Pfam Serine aminopeptidase, S33 69 209 IPR022742 -
Pumo4g03760 628 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 544 596 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03760 Pumo-Chr4 77548880 77558698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03760 308 628 bZIP Transcription Factor Family AT3G44460 43.768 5.34e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g03760 Hydrolase_4 7.5e-10 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03760 - - gmx:100809863 575.089