Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03724 ATGTCTTCCAACAATAGAAGGTTCATGAGAGCTCTACTCAAAGCAAATGGAGGCTGTGGGTGTAGCAAACCGAAATCCTCTGACGTACACGAACCCACCCCAAAACCCAAAATCTCCATTTACCAAAACACAAACCCTAGCAGCCTCAATTCATCCACCACTTCTGGCGACCGCAACGACGACGACGAAGTCTTCACTTCTTCCACCACCATCTCCGAACCCGACACAAATCATCAAAACCCCAACAACAACAACAGCATGCCAAAACCAAGTCCAAAACTGGTCGACAGCATCGCCGTTGAGAAGGACTCAAAGGACCCACATAAGGATTTTCGAGATTCCATGCTCCAAATGATCTTGGAGAGAGCGATCTACACAGAAACCGATCTCCAAGAGCTTCTCGAGTGCTTCCTCCAGCTGAACGCCACGTGTCACCACCATGTCATCGTCCAAGCCTTCATAGAGATCTGCGAAGAAGTGTTCCCGAAGAAGAAGAACATCATCAGTGGTGGTGGCGCTCCTGCTGATCAACAATGTCGCAGGAACCAGATCATTCGAAAGAGTCGTCGGTGA 573 0.4904 MSSNNRRFMRALLKANGGCGCSKPKSSDVHEPTPKPKISIYQNTNPSSLNSSTTSGDRNDDDEVFTSSTTISEPDTNHQNPNNNNSMPKPSPKLVDSIAVEKDSKDPHKDFRDSMLQMILERAIYTETDLQELLECFLQLNATCHHHVIVQAFIEICEEVFPKKKNIISGGGAPADQQCRRNQIIRKSRR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03724 190 MobiDBLite consensus disorder prediction 65 91 - -
Pumo4g03724 190 NCBIfam uncharacterized plant-specific domain TIGR01568 98 158 IPR006458 -
Pumo4g03724 190 MobiDBLite consensus disorder prediction 16 93 - -
Pumo4g03724 190 ProSiteProfiles OVATE domain profile. 100 159 IPR006458 -
Pumo4g03724 190 MobiDBLite consensus disorder prediction 37 55 - -
Pumo4g03724 190 Pfam Transcriptional repressor, ovate 104 161 IPR006458 -
Pumo4g03724 190 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 161 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03724 Pumo-Chr4 77016746 77017504 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo4g03724 Ovate 6.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03724 - - gmx:102670259 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03724 4 77016746 77017504 Pumo4g03724 4 77016746 77017504 ECH
Pumo4g03724 4 77016746 77017504 Pumo11g01272 11 42334767 42335686 PCT