Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g03718 | ATGGAAGGTGTTCAGATTGAAAAAGTCTTCATCTTGTTTTGTTTTGGTCTAATAATTACAATGAGTTATGGTGCTACAAACCCAGATGATGTCAAAGTTTTGAATGATTTCAGAAAAGGGTTGGAGAATCCAGAGCTTTTGAAGTGGCCAGAGGAGGGAGATGATCCCTGTGGTCCTCCTTCATGGCCTTTTGTGTACTGTTCTGGAGATAGAGTAACTCAGATTCAGGCTAAGAATCTTGGTCTTAGAGGATCATTGCCTCAGAACTTTAATCAACTCTCAGAACTCTACAATTTGGGTCTCCAACGCAACAACCTTAGTGGGATGTTGCCTGCTTTTAGTGGATTATCCAAATTGGAATTTGCTTTCTTGGATTACAATGCATTTGATGCAATCCCAGCTGATTTCTTTGATGGACTTAGCAGCCTTAGGGTCTTGTCTTTGGAAGAAAATCCACTGAATGTAAGTAGTGGCTGGTCGTTTCCCATGGATTTAGAAAAGTCAGTGCAATTAACTAATCTTTCTTTGGTGCATTGTAATTTGGTTGGACCATTGCCGGATTTTCTGGGCACACTGCCATCCCTCACAAATCTGAGGCTTTCAGGGAACAAGCTTTCTGGTGCTATTCCAGATACTTTTGCTCAATCTTCAATCCAGGTTTTGTGGTTGAATGATCAAGAAGGTGGTGGATTGACTGGTCCTATTGATGTTATTGCTTCAATGATTTTCCTTCGACAGGTTTGGCTACATGGAAACCAGTTCACTGGGCCAATTCCTCAGAATATTGGAAATCTTACTTCCTTGCAGGAACTCAATCTCAATAGTAATCAACTTGTTGGCTTGATTCCAGAGTCCCTAGCACATATGGACCTTGAGATCCTAGTGTTAAATAATAACATGCTAATGGGTCCAATACCAAAATTTAAGGCTGTCAATGTTTCTTATGATGACAATTTATTTTGTCAACATGAGCCTGGGATTGAATGTTCCCCTCAAGCTACTGTACTGCTGGATTTTCTGGATAAGCTGAATTACCCTTCATTTCTCATTTCTGATTGGGTTGGTGATGAACCATGCACACGCAGCACAGGGTCATGGTTTGGATTGAGCTGCAATTCCAACTCAGAGGTATATATTATCAATCTACCTAGACACAAGCTAAACGGTACTCTAAGTCCCTCACTTGCTAAGTTAGATTCACTTCTTGAAATTAGGCTGGCAGGAAACAATATAACAGGCTCAGTTCCCAGTAATTTTACCAACTTAAAATCTCTGAGGTTGTTGGACTTAAGTGATAACAACCTTGAGCCTCCATTTCCAAAATTTCATAACGATATGAAGGTTATTACTGTGGGTAACCCTCTTCTTCCTAATCAAACTGGAGGAAGTCCTAGTCCTATGCCTATCAACAGCCCACCTTCACCACAGAATCCATCACATCCTCCATCCTCTCATGAGCCACCTGTTCCAGATCAGAGTTCAAGACCAAATCAATCCAAACCAAATGACTTGAAAATATTCAAAACAGTAGGAATAGTGGCTGGAGTTGCAGTGTTTGCAGTTGTAGCACTTTTGGTTGTTTATCTCTTCCTATGTTGCAGGAAGAACAAAAAAGCCTCCTTGGATGCTCCAAGTTCCATTGTGGTTCACCCTCGCGATCCTTCTGATCCAGATAACATGATTAAAATTGCAGTTTCAAACGCCACTGGAAGTTTGTCAACAAAGACTGGGACAAGTTCTCTTAGTAACATTAGTGGTGAAACTCAAAACTCTCACATAATTGAGGATGGCAACCTTGTCATCTCTATACAAGTACTACGCAAGGTTACCAATGATTTTGCCTCGGAAAATGAACTAGGCCGTGGAGGGTTTGGGACTGTTTACAAGGGGGAACTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGCATGGGGTTATTAGCAGTAAGGCAATGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTCCGGCACCGGCATCTGGTATCCTTGTTGGGGTATTCCATTGAAGGCAATGAAAGACTTTTGGTTTATGAATATATGTCTCTTGGAGCTCTAAGCCAGCATCTTTTTCACTGGAAAAGCTTGAAGTTGGAGCCTTTGTCTTGGTCACAGAGGCTAGCGATAGCACTAGATGTTGCTAGAGGGATAGAGTACCTTCACAGTCTTGCCCGTCAGACCTTTATTCATCGAGATCTCAAGTCTTCTAATATCTTATTGGGTGATGATTTTCGGGCTAAAGTTTCAGACTTTGGTTTGGTGAAGCATGCCCCAGATAGTGAGAAGTCTGTAGCAACCAAGCTTGCTGGGACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTACGGTGTGGTGTTGATGGAACTTCTGACTGGACTTGTGGCACTTGACGAGAGCCGGCCAGAGGAAAGCCGGTACTTAGCTGAATGGTTTTGGCGAATTAAATCGAGCAAGGAGAAGCTTATGGCTGCCATTGATCCAGTTCTGGAGGCATCTGAAGAAACTTCTGAGAGCATAACCATTGTAGCTGAACTTGCTGGACACTGCACTGCAAGGGAAGCACATCATAGGCCAGATATGAGTCATGCAGTCAATGTCCTAGCAGCATTAGTGGAAAAATGGCAACCAGTTGATGATGAATTAGATTGCTACTCTGGCATTGACTACACAAGACCACTTCCTCAAATGTTGAAGATTTGGAAGGAAGCAGAAAGCAAAGAGTTTAGCTATGCTTCTAGTCTTGAAAACAGCAGAAGCAGTATTGCAGCAAGGCCACTTGGGTTTGCAGACTCTTTTACTTCTGCTGATGCAAGATGA | 2883 | 0.4232 | MEGVQIEKVFILFCFGLIITMSYGATNPDDVKVLNDFRKGLENPELLKWPEEGDDPCGPPSWPFVYCSGDRVTQIQAKNLGLRGSLPQNFNQLSELYNLGLQRNNLSGMLPAFSGLSKLEFAFLDYNAFDAIPADFFDGLSSLRVLSLEENPLNVSSGWSFPMDLEKSVQLTNLSLVHCNLVGPLPDFLGTLPSLTNLRLSGNKLSGAIPDTFAQSSIQVLWLNDQEGGGLTGPIDVIASMIFLRQVWLHGNQFTGPIPQNIGNLTSLQELNLNSNQLVGLIPESLAHMDLEILVLNNNMLMGPIPKFKAVNVSYDDNLFCQHEPGIECSPQATVLLDFLDKLNYPSFLISDWVGDEPCTRSTGSWFGLSCNSNSEVYIINLPRHKLNGTLSPSLAKLDSLLEIRLAGNNITGSVPSNFTNLKSLRLLDLSDNNLEPPFPKFHNDMKVITVGNPLLPNQTGGSPSPMPINSPPSPQNPSHPPSSHEPPVPDQSSRPNQSKPNDLKIFKTVGIVAGVAVFAVVALLVVYLFLCCRKNKKASLDAPSSIVVHPRDPSDPDNMIKIAVSNATGSLSTKTGTSSLSNISGETQNSHIIEDGNLVISIQVLRKVTNDFASENELGRGGFGTVYKGELEDGTKIAVKRMEHGVISSKAMEEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMSLGALSQHLFHWKSLKLEPLSWSQRLAIALDVARGIEYLHSLARQTFIHRDLKSSNILLGDDFRAKVSDFGLVKHAPDSEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLVALDESRPEESRYLAEWFWRIKSSKEKLMAAIDPVLEASEETSESITIVAELAGHCTAREAHHRPDMSHAVNVLAALVEKWQPVDDELDCYSGIDYTRPLPQMLKIWKEAESKEFSYASSLENSRSSIAARPLGFADSFTSADAR | 960 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g03718 | 960 | FunFam | Leucine-rich repeat receptor-like kinase | 331 | 459 | - | - | |
Pumo4g03718 | 960 | SUPERFAMILY | L domain-like | 331 | 446 | - | - | |
Pumo4g03718 | 960 | Gene3D | Ribonuclease Inhibitor | 331 | 459 | IPR032675 | - | |
Pumo4g03718 | 960 | Gene3D | Transferase(Phosphotransferase) domain 1 | 691 | 906 | - | - | |
Pumo4g03718 | 960 | SUPERFAMILY | L domain-like | 26 | 308 | - | - | |
Pumo4g03718 | 960 | ProSitePatterns | Protein kinases ATP-binding region signature. | 619 | 641 | IPR017441 | GO:0005524 | |
Pumo4g03718 | 960 | PANTHER | OSJNBA0070M12.3 PROTEIN | 11 | 960 | - | - | |
Pumo4g03718 | 960 | Pfam | Leucine rich repeat N-terminal domain | 331 | 372 | IPR013210 | - | |
Pumo4g03718 | 960 | Pfam | Leucine rich repeat N-terminal domain | 28 | 68 | IPR013210 | - | |
Pumo4g03718 | 960 | SUPERFAMILY | Protein kinase-like (PK-like) | 591 | 889 | IPR011009 | - | |
Pumo4g03718 | 960 | SMART | LRR_typ_2 | 265 | 288 | IPR003591 | - | |
Pumo4g03718 | 960 | SMART | LRR_typ_2 | 140 | 163 | IPR003591 | - | |
Pumo4g03718 | 960 | SMART | LRR_typ_2 | 192 | 215 | IPR003591 | - | |
Pumo4g03718 | 960 | SMART | LRR_typ_2 | 93 | 115 | IPR003591 | - | |
Pumo4g03718 | 960 | SMART | LRR_typ_2 | 398 | 421 | IPR003591 | - | |
Pumo4g03718 | 960 | SMART | LRR_typ_2 | 116 | 139 | IPR003591 | - | |
Pumo4g03718 | 960 | SMART | serkin_6 | 613 | 892 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo4g03718 | 960 | Pfam | Protein tyrosine and serine/threonine kinase | 616 | 887 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo4g03718 | 960 | CDD | STKc_IRAK | 619 | 889 | - | - | |
Pumo4g03718 | 960 | ProSiteProfiles | Protein kinase domain profile. | 613 | 892 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo4g03718 | 960 | FunFam | receptor protein kinase TMK1 | 691 | 908 | - | - | |
Pumo4g03718 | 960 | MobiDBLite | consensus disorder prediction | 466 | 489 | - | - | |
Pumo4g03718 | 960 | Gene3D | Phosphorylase Kinase; domain 1 | 574 | 690 | - | - | |
Pumo4g03718 | 960 | MobiDBLite | consensus disorder prediction | 453 | 501 | - | - | |
Pumo4g03718 | 960 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 738 | 750 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo4g03718 | 960 | FunFam | Receptor-like kinase TMK4 | 28 | 326 | - | - | |
Pumo4g03718 | 960 | Gene3D | Ribonuclease Inhibitor | 28 | 327 | IPR032675 | - | |
Pumo4g03718 | 960 | FunFam | receptor protein kinase TMK1 | 575 | 690 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g03718 | Pumo-Chr4 | 76952837 | 76956895 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g03718 | 84 | 907 | Receptor kinase-like Gene Family | AT1G55610 | 31.007 | 1.27e-87 | 303 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Pumo4g03718 | PK_Tyr_Ser-Thr | 1.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g03718 | - | - | gmx:100785090 | 1688.32 |