Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03715 ATGGGGCTTTTGTTGAAAGAAGTTTTGAGGAACCTCTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCACAATTCCAAGCTATTAATCTGGGAAGAATGCTATTATGAACCTTTGCCATGCCCTCCACGCATGTTTGGGATGCCTGATTTGCCTTACCAGAATGGGGAAGGATGCTGGTTTTCTTCAGAGTCTCAGTCATCTCAGCTTGGGATTCAAGAGGAGGACCGAGTCTCTTCGTTAATTAACAAAATGACTGTAAACAATTCAGTTATCATTGCAGGTGAAGGTATAATTGGACGGGCTGCATTTACAGGCAACCATCAGTGGATTCTTTTGAACAATTTCACTAAAGATGCATATCCTCCAGAGGTATATTCTGAGGTGCATCCCCAATTTTCAGCTGGAATACAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCTATAATTGAGAATATGGGATTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCATCAAAACTTACTATTGAAAGACTTGCTGGACCTCCTATTGCTGGTGTGCCTGTATCTGTTGATCCACCTGTCATTACCTCAAACTACCCTCCCTCAGTAACTAGTGGCTCCAATCAGCAAAATAATTCATCTCATACTTCAATGCCCTTTGTTCAAACACCTTGTCCTCTAAAGGCAGAGACAAATACTTGCCAGGGTTCTGCATTGACACCCCAAACCCGTAAGCTGAACCAGATATCCAATAACTCTTGCCAGCCAAAGGTGATTCCAATGAGTAAAACAAACTTTGCTAGCCAACGAGAGAATAAAGCTGTGGAAGCTGAAGTAATACCCTCTGATCATGATTCATGCCTGCAGCAACATTCTGCTTCATATAATAATGCAAGATCTGCATTCAATAACTTGACTGGTTTTGGGTCTTTTGGTCAATCTGGTCAAAGTGCTGATAATCTATCATTAATGGAGCAACAAATCATATCAGCCATTGAGAATCGAGATAATGGTAATCCTTGTATAAATGCATCAAGTACCTTAAACATGTCTCAACTAAAAACAGATGGAGGCCATATACTTGGCCACAATCTGAGTTCTGGCAGTACTTCATTACTAGGAGGAATCCCAATACATGGTGGGATGAGTACTCTTTTGAGGTCAAATCTGATTACTAGTTCTGGTTCAAAATCTCCCCAAGCATCCACAGCTGATTTATCTGGCGTAGGAGTTGGGATTGGACTTCAAAATTGTGATTCTTCAACTAAAGCAAGGGGTTGTTCTTTGGCAAATTTGACTAGTCAATCAAGCACCTTTCCCATGCATGTAGAAGGTTCTGATCAGAAGATTCTCCCTGTAGATCTAAAGTGTGCTTCAACAAATCAGAAGATAGATTATGATTTGCTTCAGGCCACTAATCTCCCCTCTTTTCATGTTGAGGAACATGTGCCCATCAGTGGTCATATCCCTGGTTTTGCCCACTATTGCCCTCGTAAAGATGGTAGTAGTCAATCTATGATGATTATGAATCCAAAACACAAACTAGACTGTGCTAAACCTCCATCAGGTGATGACCTGTTCGATGTTTTAGGGGTGGATTTGAAAAACCAATTGCTGAATGGAAACTGGAATAAACTCTTTGCTGATGAATTGGATGCTAGTACAGAAAATATGGACAAAAAGGTAGCACCTATGAATATGCAGGGCACAACTACAAATCCTGATATTTATTCAGTTAAAGAAGCAATATCAGACAGTGGCATCTTTTCTGGGATTGGAACAGACCATCTCTTGGATGCTGTGGTCTCAAAAGCCAAATCTGTTGTGAAACAGGATTCGGATGACATGTCTTGCGGGACAACATTGACAAGGAATAGCACTTCCTCTGTTCCTTCTCCTGCCTGCAGGCCGGTTATGTCTGGACATTTCCAAGGGGGAATGTTTGATTTTCCTAAGAATGGTGGTAAAACAGCTGCCACAGAAACTAGTTTTCTTAGGACTGGATGTAACAAAGATGATGCCGGAAACTGTTCTCAAACTAGTTCTGTTTATGGCTCTCAACTTAGTTCATGGGTTGAGAATAGTGGAAGTGTGAAACGTGAGAATAGTGTTTCAACTGGATACTCAAAGCGGCCAGATGAAGCTTGCAAACCAAATCGTAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTCGACCGAAAGATCGTCAAATGATTCAAGATCGAGTGAAAGAGTTACGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGATAAGCTGAAACAAACAGGGGAGTCTAAGATTATTAACAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGTGGGGCTACATGGGCGTATGAAGTTGGCTCACAATCAATAGTTTGCCCTATTGTAGTTGAGGATCTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAGCGAGGTTTCTTTTTGGAAATAGCCGATTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGGGTAATGGAAGCTCACAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTTATGTCGCTTGTTCGTCTTTTGGAGCAAACGGTGAAGGGTAACGCATCGTCATCCAATGCAATTGATAACATGATGGTGTATCAGTCTTTCCCACAGGCTACTCAGATACCAGCAACTGGAAGGCCTAGTAGTTTGCAATGA 2880 0.4205 MGLLLKEVLRNLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCPPRMFGMPDLPYQNGEGCWFSSESQSSQLGIQEEDRVSSLINKMTVNNSVIIAGEGIIGRAAFTGNHQWILLNNFTKDAYPPEVYSEVHPQFSAGIQTVAVIPVLPHGVVQLGSFLPIIENMGFVNDVKSLILQLGCVPGALLSEDYSSKLTIERLAGPPIAGVPVSVDPPVITSNYPPSVTSGSNQQNNSSHTSMPFVQTPCPLKAETNTCQGSALTPQTRKLNQISNNSCQPKVIPMSKTNFASQRENKAVEAEVIPSDHDSCLQQHSASYNNARSAFNNLTGFGSFGQSGQSADNLSLMEQQIISAIENRDNGNPCINASSTLNMSQLKTDGGHILGHNLSSGSTSLLGGIPIHGGMSTLLRSNLITSSGSKSPQASTADLSGVGVGIGLQNCDSSTKARGCSLANLTSQSSTFPMHVEGSDQKILPVDLKCASTNQKIDYDLLQATNLPSFHVEEHVPISGHIPGFAHYCPRKDGSSQSMMIMNPKHKLDCAKPPSGDDLFDVLGVDLKNQLLNGNWNKLFADELDASTENMDKKVAPMNMQGTTTNPDIYSVKEAISDSGIFSGIGTDHLLDAVVSKAKSVVKQDSDDMSCGTTLTRNSTSSVPSPACRPVMSGHFQGGMFDFPKNGGKTAATETSFLRTGCNKDDAGNCSQTSSVYGSQLSSWVENSGSVKRENSVSTGYSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSQSIVCPIVVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNAIDNMMVYQSFPQATQIPATGRPSSLQ 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03715 959 MobiDBLite consensus disorder prediction 716 733 - -
Pumo4g03715 959 MobiDBLite consensus disorder prediction 737 762 - -
Pumo4g03715 959 CDD bHLH_AtLHW_like 751 820 - -
Pumo4g03715 959 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 953 IPR043561 GO:0003700|GO:0006355
Pumo4g03715 959 MobiDBLite consensus disorder prediction 638 658 - -
Pumo4g03715 959 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 747 796 IPR011598 GO:0046983
Pumo4g03715 959 MobiDBLite consensus disorder prediction 224 244 - -
Pumo4g03715 959 MobiDBLite consensus disorder prediction 716 762 - -
Pumo4g03715 959 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03715 Pumo-Chr4 76881787 76888109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03715 535 944 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.899 1.01e-118 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03715 - - gmx:100787748 1654.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03715 4 76881787 76888109 Pumo4g03715 4 76881787 76888109 ECH
Pumo4g03715 4 76881787 76888109 Pumo11g01253 11 42162130 42168992 PCT