Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03707 ATGGATGTCGATTCCTCGATGGTGCCGGAGACCGATCACGATCCGGCCGTGCAGAACCACGCCGCCGCCGCTCCGGCGCCGGCCGCGACAGAGGGAGAGCAGCTAGCGGAGCCGCCGTCGTCCGGAGCCGGATCTCCGGCGCAGACGCCGCCGGCGCCTGCTTCCGCGCCGCAGAGTCCGGTGGTAGGACCGAGGCTGGCGCCAACTTACACGGTTGTGAATGCAATTTTGGAGAAGAAGGAGGATGGACCGGGGCCTAGGTGCGGCCACACATTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGCCGGGGTACATTGGTCCGAGGCTGATTTTGTTCGGTGGTGCCACTGCTCTTGAAGGAAATTCCGCGGCGTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATTCGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAACCTCCAACTCCGAGGGCTGCACATGTGGCAACTGCTGTAGGAACTATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTCCTTGATCTCACTCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGCCCTGGACCCGGGCCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCTAAGCCTTATGAATGGCGCAAGCTGGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGACTTCTTCTGCTTTGTGGAGGCAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCTCCATCACCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTTGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACTGGTAGATACAGTGCTGATGCAGCAGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGGCACGCAGCTGCCGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGCTAGATGACCTACTTGTTGCTGAAGATCTTGCTGCCGCTGAAACAACAGCTGCTGCTTCACATGCTGCTGCTGCTGCAGCTGCATCTAATGTACAAGCAGGACGCTTACCTGGACGATATGGATTTGCTGATGATAGAACGGGGCAAACAATGCCTGAGGCGGCAGCTGATGGTTCTGTTGTTTTGGGAAATCCAGTTGCGCCACCAATGAATGGTGATATTTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGACCTCGGCGAACTGCTAAAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCAGCACTGGCTGCTGCCAAGGCACGGCAGGAGAATGGAGAAGTTGAATTGCCTGACAGAGACCGTGGGGCGGAGGCTACCCCAAGCGGGAAACAAACATCTTCCTTGACTAAGCCTGATTCTGCAGGTTCAAATAACATTACTCCTGGTGGAGTTCGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAAGGCAGGCGAGTCGGTTACGGGACTCCAGAAAATGCATCTGCTGCCAGGAAATTATTAGATCGGCAGATGTCTATTAATAGTGTGCCAAAAAAGGTCATTGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGGCAGTTTTTCTTAGATTGTAATGAAATCGCTGATCTTTGTGACAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTGCAACTTAGGGCACCAATTAAAATATTTGGTGATCTACATGGACAGTTTGGTGATCTCATGCGCCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTGCTCTGAAGGTTGAGTATTCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCACTGTTTGGTTTCCGAATTGAATGCATAGAGAGGATGGGTGAGAGAGACGGAATTTGGACATGGCATCGGATAAACAAGCTGTTTAATTGGCTTCCTCTGGCAGCTTTAATTGAGAAAAAAATTATTTGCATGCACGGTGGTATTGGTCGTTCAATAAATCATGTAGAACAGATTGAAAACATTCAGCGTCCAATTCCAATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGACTGCGGCCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGATCGGGTCATGGAATTTTGTAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTTTCAGCTACAAATTATTGTGGTACCGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAACTGATTCATCCATTACCACCAGCAATTTCTTCACCAGAAACGTCACCAGAACGACATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCTCCAACACCAACTAGAGGCCGTCCCCCAGTAACAAATGACCGAGGTTCGCTGGCTTGGATATAG 3006 0.4947 MDVDSSMVPETDHDPAVQNHAAAAPAPAATEGEQLAEPPSSGAGSPAQTPPAPASAPQSPVVGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASNVQAGRLPGRYGFADDRTGQTMPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKQTSSLTKPDSAGSNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVGYGTPENASAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYSNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03707 1001 Gene3D - 68 264 IPR015915 GO:0005515
Pumo4g03707 1001 FunFam Serine/threonine-protein phosphatase 267 467 - -
Pumo4g03707 1001 SUPERFAMILY Metallo-dependent phosphatases 655 961 IPR029052 -
Pumo4g03707 1001 Pfam Kelch motif 328 374 IPR011498 GO:0005515
Pumo4g03707 1001 PRINTS Serine/threonine phosphatase family signature 698 725 IPR006186 GO:0016787
Pumo4g03707 1001 PRINTS Serine/threonine phosphatase family signature 894 914 IPR006186 GO:0016787
Pumo4g03707 1001 PRINTS Serine/threonine phosphatase family signature 733 760 IPR006186 GO:0016787
Pumo4g03707 1001 PRINTS Serine/threonine phosphatase family signature 766 790 IPR006186 GO:0016787
Pumo4g03707 1001 PRINTS Serine/threonine phosphatase family signature 916 932 IPR006186 GO:0016787
Pumo4g03707 1001 PRINTS Serine/threonine phosphatase family signature 804 830 IPR006186 GO:0016787
Pumo4g03707 1001 Pfam Calcineurin-like phosphoesterase 698 905 IPR004843 GO:0016787
Pumo4g03707 1001 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1001 - -
Pumo4g03707 1001 MobiDBLite consensus disorder prediction 977 1001 - -
Pumo4g03707 1001 PIRSF STPPP_BSU1 36 1001 IPR012391 GO:0004721|GO:0009742
Pumo4g03707 1001 MobiDBLite consensus disorder prediction 546 560 - -
Pumo4g03707 1001 SMART pp2a_7 670 954 IPR006186 GO:0016787
Pumo4g03707 1001 MobiDBLite consensus disorder prediction 1 65 - -
Pumo4g03707 1001 Pfam Galactose oxidase, central domain 222 275 - -
Pumo4g03707 1001 Gene3D - 637 972 IPR029052 -
Pumo4g03707 1001 CDD MPP_Bsu1_C 650 952 IPR041758 -
Pumo4g03707 1001 SUPERFAMILY Kelch motif 141 431 IPR015915 GO:0005515
Pumo4g03707 1001 FunFam Serine/threonine-protein phosphatase 66 263 - -
Pumo4g03707 1001 MobiDBLite consensus disorder prediction 44 58 - -
Pumo4g03707 1001 MobiDBLite consensus disorder prediction 561 582 - -
Pumo4g03707 1001 MobiDBLite consensus disorder prediction 544 584 - -
Pumo4g03707 1001 FunFam Serine/threonine-protein phosphatase 634 974 - -
Pumo4g03707 1001 Gene3D - 265 455 IPR015915 GO:0005515
Pumo4g03707 1001 ProSitePatterns Serine/threonine specific protein phosphatases signature. 767 772 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03707 Pumo-Chr4 76755616 76766821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03707 662 897 Calmodulin-binding Proteins AT5G63870 29.044 5.04e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03707 - - gmx:100790406 1858.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03707 4 76755616 76766821 Pumo11g01246 11 41970349 41984436 PCT