Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03702 ATGGGTGTCTCTGGGAAGTGGATTAAAGCATTGGTGGGTCTAAAGAAATCAGAAAAGCCAGGGTCTTCAGATAAGGATGGAAATCTTGGCAAGTTTCACCATCAGAGAAGGCATGATCTCGAATTTGATAATGGTAAACTTCCAAACGAATTGGATAATGATGCCACTCCACCTGTTGAAGATGATAATGGCCATGCAAACCTTGATGCCCACTGTTCATCTTGTACTTCACAACAAGCACATGATGCTGCACATAATCAACAAACGAGGGAGGAATGGGCAGCAATACGCATTCAAACAGCATTCCGAGGATTTCTGGCCAGAAGAGCACTACGGGCTTTGAAAGGTGTGGTAAGGCTTCAGGCTCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCTGCAATAACACTCCGTTGTATGCAAGCATTGGTGAGGGTTCAAGCTTGTGTTCGGGCTAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAACATCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATACTGTAGGATCTGTTGAAGAAATTCAGGCTAAGATATTGAAGAGACAAGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCCTGTTTCCTCTGGATTTGAACCAGATAAAAATAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTTGTTGACATTAATATGAAGGATGGAGTAACAGTACATGAAGATGGAGCTAAGGATGATAAAAATGGAACCACACCTCAGTTGAGCTCTGCTAACAAGAAACCATTCCCATCAAACACTCATCCAAACCTGACAAGTCAAGGAACTGGTCCTACTATTTCTGATGGCTGTGATTCTTCTCCTAGTAAGTCTGCAGGTTTGCTAGAATCATCAAACACACAGCCTGTTAAGCCAACTTCTAAGACAAATGTTGAAAATACTGTTGAAGAAGTTAACTCAAAACCTAGAATTGGGTCAAGATCTCATAGTAATCCAAAGGAGAGAACATCACAGGCAAATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAATGGGGGTGGTGCTGGCTCTCAAATAGTTAAACACCCTATTAGCACTAATGTGAAAGGGACGCTAAGCACGCAAAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGCGAATACAAAATCAGTTCCATAG 1287 0.4343 MGVSGKWIKALVGLKKSEKPGSSDKDGNLGKFHHQRRHDLEFDNGKLPNELDNDATPPVEDDNGHANLDAHCSSCTSQQAHDAAHNQQTREEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQACVRARRVCMALETQASQQKHQQNLANEARVREIEEGWCDTVGSVEEIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKNSWGWNWLERWMAVRPWENRFVDINMKDGVTVHEDGAKDDKNGTTPQLSSANKKPFPSNTHPNLTSQGTGPTISDGCDSSPSKSAGLLESSNTQPVKPTSKTNVENTVEEVNSKPRIGSRSHSNPKERTSQANKQAKKRLSLPNNGGGAGSQIVKHPISTNVKGTLSTQKSSRDKPKLNGRRDANTKSVP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03702 428 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Pumo4g03702 428 PANTHER IQ-DOMAIN 5-RELATED 1 388 - -
Pumo4g03702 428 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Pumo4g03702 428 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Pumo4g03702 428 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Pumo4g03702 428 MobiDBLite consensus disorder prediction 271 428 - -
Pumo4g03702 428 Gene3D - 88 142 - -
Pumo4g03702 428 SMART iq_5 113 134 IPR000048 GO:0005515
Pumo4g03702 428 SMART iq_5 90 112 IPR000048 GO:0005515
Pumo4g03702 428 MobiDBLite consensus disorder prediction 280 411 - -
Pumo4g03702 428 FunFam IQ-domain 11 90 141 - -
Pumo4g03702 428 MobiDBLite consensus disorder prediction 41 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03702 Pumo-Chr4 76719561 76726577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03702 1 420 IQD Protein Family AT3G22190 54.884 2.24e-128 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03702 - - gmx:100819346 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03702 4 76719561 76726577 Pumo4g03702 4 76719561 76726577 ECH