Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03697 ATGGATCCCTTCATCCGCAAGCTCCGTCGCCACCTTCTCGCATGGCTTCACCGATCTCGCTCCGGTGCGGTGTTTTTTGTGCGGAGAATTTCGTATAAGGACGTTAGAAGAGCCACGGACGGTTTCCACAGAGTTGTTTATAGCAATTCTGAGGTGTCTGCGTATGCTGCCAAGTTTGGAGACGGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGTTTCGACGAAGGAAACGACAATTTCTACAGACACGTGCAGTTCTTGGGGCGCTTGCGTCATCGCCATCTTCTCTCGCTCAGAGGCTTTTCCGTCGGGCGCAATCACAAGAGATTGCTCATATTTGACAACATAGAAAATGGAAGCTTGAAGGATCATCTAAATGACCCTTTGAAGACTCCCTTAGATTGGAGGACGAGGTTACAGATAGCTAATGGCGTTGTGGCTGCACTGGAATACTTGTTTCTCTTCAGTGAACCACCAGTGTGTCATGTCTCTATCACCTCAGGCAATATCATGTTAGATGAGAACTTCACAGCCAAACTATCTGACTTTGGCCTTCTTACATCTGGTGGAAATTCTGTTATGGTGCCATATTCAGAAGATTTGAAGCAGAGAAGTTGCAAGATTATATTCCAACTAGGAGTGCTCATATTGGAACTAGTCACCGGTCAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAAGAATCCCGATTTTACAATTCCATTGATAAGATGATAGACCCTGACCTTGGTAACGATTATGACTGTACGGAGCTTAAAAGTCTTCTGGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATTTACAATTCCACAGTTATTCCGGCATCTCCAAAAGAAGATTGATATAAGCCATTACTAG 903 0.4463 MDPFIRKLRRHLLAWLHRSRSGAVFFVRRISYKDVRRATDGFHRVVYSNSEVSAYAAKFGDGGGVCLVREVKGFDEGNDNFYRHVQFLGRLRHRHLLSLRGFSVGRNHKRLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSGNIMLDENFTAKLSDFGLLTSGGNSVMVPYSEDLKQRSCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNDYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQKKIDISHY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03697 300 SUPERFAMILY Protein kinase-like (PK-like) 24 268 IPR011009 -
Pumo4g03697 300 FunFam Protein kinase superfamily protein 117 206 - -
Pumo4g03697 300 ProSiteProfiles Protein kinase domain profile. 32 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03697 300 Gene3D Transferase(Phosphotransferase) domain 1 210 298 - -
Pumo4g03697 300 Gene3D Transferase(Phosphotransferase) domain 1 117 208 - -
Pumo4g03697 300 Gene3D Phosphorylase Kinase; domain 1 15 115 - -
Pumo4g03697 300 PANTHER OS01G0253100 PROTEIN 27 295 - -
Pumo4g03697 300 FunFam Protein kinase superfamily protein 16 115 - -
Pumo4g03697 300 FunFam probable receptor-like protein kinase At1g49730 210 299 - -
Pumo4g03697 300 Pfam Protein tyrosine and serine/threonine kinase 78 189 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03697 Pumo-Chr4 76587332 76590715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03697 22 299 Receptor kinase-like Gene Family AT3G19300 35.000 3.34e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pumo4g03697 PK_Tyr_Ser-Thr 2.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03697 - - gmx:100791979 577.4