Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03679 ATGAGTTGTGTAGCATGTACGGTGATGCACTCAAAATGCGATAGTAACTGCGTGTGGAAGGAAGCATTTCCAGGTCAAAATGAAGGAGAGAAAGATTTGAAACCCCTCGCTGAGGTGTTCGGGGGTTTTACTAAAATGACTCAGCTTGTTAAAAGGAAGACCAATCGGAAGGATTGGGCTAGGGCTGCAAGACATGTCTTAAATGAAGCCCGTGCACGCGTGAAGGATCCCGTGAGAGGAATGGATGGTTTGTTAGAGGACCTCCAAGAAAAGTTATCAAATTTAGAAATTCAATTAATGTCTGGAGGAGTTGATATGAGACGAGATGTCATCACAGTGGCAGCTGGAGAGCTGCCAGCATTTGGGTTATTTTCTGCTGTAGGTTTCATTTCATCAGTAACACTCGACAAACCTGGTCCTCCGGAGATAAGGGACGAAATCCCCTCGATTTGGTGCAAACCTGGTGTACATCGGCACCCACTCGCAGTGGCTTCAAATCACAAAGGCGATGAAGTCGGTGCTCCAGTTCGGTGCGACTCCGGTGTTGTGGATTTGGTGCAGCTCCGGCGAAGTTGA 576 0.4757 MSCVACTVMHSKCDSNCVWKEAFPGQNEGEKDLKPLAEVFGGFTKMTQLVKRKTNRKDWARAARHVLNEARARVKDPVRGMDGLLEDLQEKLSNLEIQLMSGGVDMRRDVITVAAGELPAFGLFSAVGFISSVTLDKPGPPEIRDEIPSIWCKPGVHRHPLAVASNHKGDEVGAPVRCDSGVVDLVQLRRS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03679 191 Coils Coil 78 98 - -
Pumo4g03679 191 ProSiteProfiles LOB domain profile. 1 106 IPR004883 -
Pumo4g03679 191 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03679 3 106 AS2 family AT1G07900 29.245 1.29e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo4g03679 LOB 7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03679 - K13944 mof:131166202 63.5438