Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03666 ATGGCGAGAACAGTGTCCAACAACGATGAAACAACGACAGCGAAAGAGGAGGGTGAGGTGAGAGATGGCGTAAGGAAGGGGCCATGGACCCCAGCAGAAGACGCGATCCTCGTAGAGTACGTGAAGAAGCACGGTGAAGGGAATTGGAACTCCGTCCAGAAAAATTCTGGCTTGTTAAGGTGCGGCAAAAGTTGCAGACTCCGATGGGCCAACCATCTCAGGCCCAATCTCAAAAAAGGTGCATTCTCTCCTGAAGAAGAACAAATCATCATCGACCTTCATTCCAAGCTCGGAAACAAATGGGCCCGAATGGCCGCACAGTTACCTGGTAGGACCGACAATGAAATAAAGAACTTTTGGAACACCAGAATGAAAAGGCGTCAGAGAGCAGGGTTACCCCTTTATCCCCCTGAAGTGCATGCAGAAGCCACTGCATACCATCTACAACAACAACACGGCTACTTGGAACAACAACAACACCCTCATTCATCTTCATCATTTTCTCTTCTCCTATCTTCTTGTTACCCCAAGAAGCTCAATGATCCTAACCAAACCCATCATCATTCCAATGCAAATCCGCTGCAAAACCAACCTGATTCTGCTAAATGTTACATCAATCCAAGCCAGCAGCAATTCAAGTTTTCAAATGAAAACAGTGGAAACAATGGAAATTTTGCTTTTCCATTATCTCCTCTTTCTCCATATGGATCATCATCCTCCACCCTTCTTAACCACAGTTTTGGTGATCATGGCTTCATAGCAGGATCTCCCTATGAACCACCCTTTGCTATGGTGCAAGGCTCCACCACTGACATCTCTTCCAACCAAACACCAACCCCTGCTTCATCCTATGCTAGTGGTGTTGATGGCTTGATGGGAGCTTCAAGCAGCATGGTTAATAATAATAATAACAATAATGATTACTATGAAGTTGCACCATTGTCTCCTCAAGGAAACAGTGGCCTGTTGGATGCTCTAGTGATGGAGGCTCAGGGACTTTCTCACAATGACAAATCAAACAGTGAGGAGGACTCAACCTTGGCTGGGAAGTTATCTTGTAAGAGAAAAAACATGGAATATGCAGAGGAGGGAGCCACTGTGCCAGCTGGGGTGTCAACCATGAAGAAGAACAGTGGCAACAGTACTACTAATGAAAGCCAGAGGGATGATGATATTAGCTCCTCTCAATTGTCAAAAGGGAAGAAACAAATTGGGGAGGACCCGTTGGAAGAGATGAATGCGATGGACGATGACTTGGTTAGCCTGCTCAACCAATTTCCCTTAGAAATGCCAATGCCCGAGTGGTACCGTAGAGGGGAAAATCAGTCATTGGGACTTGAAAATCAACCCAATGCTTCACCACCTGACCCCGCTGATCAAGAGTATGCTTGGACTCTCGGACCTTGCTGGAACAACATGCCTGGCATATGCTAA 1434 0.4616 MARTVSNNDETTTAKEEGEVRDGVRKGPWTPAEDAILVEYVKKHGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGAFSPEEEQIIIDLHSKLGNKWARMAAQLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEVHAEATAYHLQQQHGYLEQQQHPHSSSSFSLLLSSCYPKKLNDPNQTHHHSNANPLQNQPDSAKCYINPSQQQFKFSNENSGNNGNFAFPLSPLSPYGSSSSTLLNHSFGDHGFIAGSPYEPPFAMVQGSTTDISSNQTPTPASSYASGVDGLMGASSSMVNNNNNNNDYYEVAPLSPQGNSGLLDALVMEAQGLSHNDKSNSEEDSTLAGKLSCKRKNMEYAEEGATVPAGVSTMKKNSGNSTTNESQRDDDISSSQLSKGKKQIGEDPLEEMNAMDDDLVSLLNQFPLEMPMPEWYRRGENQSLGLENQPNASPPDPADQEYAWTLGPCWNNMPGIC 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03666 477 MobiDBLite consensus disorder prediction 439 460 - -
Pumo4g03666 477 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Pumo4g03666 477 MobiDBLite consensus disorder prediction 10 27 - -
Pumo4g03666 477 FunFam Transcription factor MYB97 81 163 - -
Pumo4g03666 477 FunFam MYB-related transcription factor 25 78 - -
Pumo4g03666 477 CDD SANT 28 73 IPR001005 -
Pumo4g03666 477 MobiDBLite consensus disorder prediction 1 27 - -
Pumo4g03666 477 CDD SANT 81 122 IPR001005 -
Pumo4g03666 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Pumo4g03666 477 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Pumo4g03666 477 MobiDBLite consensus disorder prediction 178 202 - -
Pumo4g03666 477 MobiDBLite consensus disorder prediction 362 404 - -
Pumo4g03666 477 Gene3D - 26 78 - -
Pumo4g03666 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Pumo4g03666 477 MobiDBLite consensus disorder prediction 371 401 - -
Pumo4g03666 477 SMART sant 78 126 IPR001005 -
Pumo4g03666 477 SMART sant 25 75 IPR001005 -
Pumo4g03666 477 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Pumo4g03666 477 Gene3D - 81 164 - -
Pumo4g03666 477 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 443 - -
Pumo4g03666 477 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Pumo4g03666 477 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03666 Pumo-Chr4 76026427 76029841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03666 20 477 MYB Transcription Factor Family AT2G32460 37.977 1.14e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pumo4g03666 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03666 K09422 - gmx:100784779 799.275