Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03658 ATGAAGAAATTTATGGTCTTGCACCTTGTGACATGGATTTGGCTATGTGGTGTTGCTCAGAGCAGAGGGCCTAGCAGTGTGAACATTGGTGCGATTTTTGCTTTCGATTCTGTCATAGGTAGAGTTGCGAAGAAGGCTATGGAAATGGCCGTTTCTGATGTCAATGAGGACCCCACAGTTCTCAAGGGAACCAAACTCAACTTGATTATGAAGGATGCCATGTGCAACGCTTTTCTGGGATCAATTGGAGCTTTTCAGGTACTTGAGAAAGGGGTTGCAGCCATAATTGGTCCACAGTCATCTGCCGTAGCTCACACGGTTTCTCAAATTGCTGATGCTCTCCAAGTTCCTCTTGTTTCATATGCTGCCACTGATCCAACCCTGTCCTCCCTCCAGTTTCCTTTCTTTATTCGAACTACGCAAAGTGACTTGGCACAAATGACTGCAATGGCTGATCTAATTGACTTTAATGGATGGAAAGAGGTCATTGTTGTATTCTTGGATGATGATTATGGAAGAAATGGAGTATCTGCTTTGAGTGATGAGCTTGAAAAAAGGAGATTGAAAATTTCTTATAAACTGCCTTTGAGTATTAAGTTTGATCTGGATGAAATCACTAACTTGCTCAATGAATCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAATCCTGATCCGAGATTGAGAATTTTTTCCATTGCCCATAAACTTCAAATGATGGCCAAGGATTATGTCTGGCTTGTCACGGATTGGCTCTCAGCTACACTAGATTCATTATCCCCAGTGAATCAGACCTCTTTCAGTGTTCTCCAAGGGGTTGTTGGTCTTCGTCAACACATTCCGGATTCCAGAAAAAAGAGAGCTTTTGATTCTCGATGGATAAAAATGCAAAAAGAAGGATTAGCAAATACTAGTTTGAATTCCTATGGAATTTATGCTTATGATACAGTTTGGGCAGTTGCACGTGCAATTGATAAATTCATCAAAGTACATAATAATATTACCTTCTCGCTTCCTGATAACTCTAAGCTATCTCATACGGTAGGAATCGGTATTCGGCTTGACAAGCTCAAAATCTTTGCTGGTGGATCTGATCTTGTTGACATATTATTACAATCAAATTTTACTGGTGTGAGTGGCCAACTTCATTTTAATTCTGACAGAAATATTGTAAGTGGTGGTTATGATATTATCAATGTCAATCAGATGGGAATTACCAGGGCTGGTTTTTGGTCTAATAATTCAGGATTTTCAGTTTTACCCCCTGAAGCTCTTAAAAAAAGGAAATATAACAGGTTTTCCCCAGATCAGAAGCTTGGCAATATTACTTGGCCAGGTGGAATGACAGATCGACCTCGTGGCTGGGTGATTGCTGATAATACCAAGCCACTGAGAATTGGAGTGCCAAAAAGAGCAAGTTTTGTTGAATTCGTAACTGAACTGCAAGATAGTCATCAAATTCAGGGGTACTGCATCGATGTCTTCAAGAAAGCCCTAGAATTTATCCCATATGAAGTTCCTTTTGAATTCAAGCCTTTCGGGAATGGTAAAGCAAATCCCAATTATGATGCACTTGTGAAAATGGTTGCTGATAATGTATATGATGCTGTTGTTGGAGACATTGCAATTGTGACAAATCGTACAATGATTGTGGATTTTTCTCAGCCTTTTGCATCATCTAACCTTGTCATAGTGGCTCCTATCAACAAAGCAAGATCAAATGCTTGGGTGTTCATCCAACCATTTACAGCAGATATGTGGTGTGCCACTGCTGCATCATTTTTGGTGGTTGGAGTTGTTATATGGATTCTTGAGCACCGAGTCAATAATGACTTCCGTGGTCCTCCTAAGAAGCAACTTGTGACAATGTTAATGTTCAGCCTCTCAACATTGTTTAAGAAAAATCAGGAAAATACCGTAAGCTCGCTTTCTAAAATGGTGATGATAGTCTGGCTTTTTCTATTGATGGTGATCACGGCTAGCTATACAGCGAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCGCCCATCACAGGAATAGATAGCTTGATTACAAGTAACTGGCCTATCGGATACCAAGTAGGATCATTTGCTTACCACTATCTGACAGATAGTCTTTATGTACCAAAATCAAGACTTGTTCCCCTAGGCTCCCCCAAAGAATACGCTTCAGCGCTTCAGAAGGGACCATCTGGTGGAGGGGTGGCAGCTATCATTGATGAGCTTCCATATGTTGAGTTATTTCTGTCAAATGAAACTGATTTTGGTATTATTGGACAGCCATTCGCGAGAAGCAGCTGGGGATTTGCTTTTCAAAGAGAGTCTCCTCTTGCCTTTGACATGTCTACAGCAATTTTGAAACTCTCCGAGAATGGAGATCTTCGTAAGATACGTGAGAAGTGGTTCTGTAAAATGGGTTGTCCTGAAGAAAGGACAAGCAACTCCAAGCCTGATCAGCTTCACTTGATTAGCTTTTGGGGTCTGTATCTCTCATGTGGTGTTGTCTCTCTTGTTGCACTTGTTGTGTTTCTGCTGCGAATGATTTGCCAATACGCCCGCTTCAAACAAAAACAAAAGGATGTTGCTTCTTCATCCTCAGAACCATCAGGCATTCATTGCTCCCAGGTTGTTGTTAACTTCTTTAACTTCATTGATGAGAAGGAAGAGGCCATCAAGAAAATGTTCACTCAATCTGACAATCATCACAACCCCAACTGA 2730 0.4095 MKKFMVLHLVTWIWLCGVAQSRGPSSVNIGAIFAFDSVIGRVAKKAMEMAVSDVNEDPTVLKGTKLNLIMKDAMCNAFLGSIGAFQVLEKGVAAIIGPQSSAVAHTVSQIADALQVPLVSYAATDPTLSSLQFPFFIRTTQSDLAQMTAMADLIDFNGWKEVIVVFLDDDYGRNGVSALSDELEKRRLKISYKLPLSIKFDLDEITNLLNESKVFGPRVYVVHVNPDPRLRIFSIAHKLQMMAKDYVWLVTDWLSATLDSLSPVNQTSFSVLQGVVGLRQHIPDSRKKRAFDSRWIKMQKEGLANTSLNSYGIYAYDTVWAVARAIDKFIKVHNNITFSLPDNSKLSHTVGIGIRLDKLKIFAGGSDLVDILLQSNFTGVSGQLHFNSDRNIVSGGYDIINVNQMGITRAGFWSNNSGFSVLPPEALKKRKYNRFSPDQKLGNITWPGGMTDRPRGWVIADNTKPLRIGVPKRASFVEFVTELQDSHQIQGYCIDVFKKALEFIPYEVPFEFKPFGNGKANPNYDALVKMVADNVYDAVVGDIAIVTNRTMIVDFSQPFASSNLVIVAPINKARSNAWVFIQPFTADMWCATAASFLVVGVVIWILEHRVNNDFRGPPKKQLVTMLMFSLSTLFKKNQENTVSSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLITSNWPIGYQVGSFAYHYLTDSLYVPKSRLVPLGSPKEYASALQKGPSGGGVAAIIDELPYVELFLSNETDFGIIGQPFARSSWGFAFQRESPLAFDMSTAILKLSENGDLRKIREKWFCKMGCPEERTSNSKPDQLHLISFWGLYLSCGVVSLVALVVFLLRMICQYARFKQKQKDVASSSSEPSGIHCSQVVVNFFNFIDEKEEAIKKMFTQSDNHHNPN 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03658 909 Gene3D - 737 771 - -
Pumo4g03658 909 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 865 IPR015683 -
Pumo4g03658 909 Gene3D - 462 576 - -
Pumo4g03658 909 FunFam Glutamate receptor 461 577 - -
Pumo4g03658 909 SUPERFAMILY Periplasmic binding protein-like II 444 806 - -
Pumo4g03658 909 Gene3D - 142 419 - -
Pumo4g03658 909 Gene3D - 772 806 - -
Pumo4g03658 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Pumo4g03658 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Pumo4g03658 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 231 254 - -
Pumo4g03658 909 CDD PBP1_GABAb_receptor_plant 28 421 IPR044440 -
Pumo4g03658 909 PIRSF IGluLR_plant 1 909 IPR017103 -
Pumo4g03658 909 Gene3D - 45 394 - -
Pumo4g03658 909 SMART GluR_14 465 808 IPR001320 GO:0015276|GO:0016020
Pumo4g03658 909 CDD GluR_Plant 464 806 - -
Pumo4g03658 909 FunFam Glutamate receptor 703 810 - -
Pumo4g03658 909 Pfam Ligand-gated ion channel 807 838 IPR001320 GO:0015276|GO:0016020
Pumo4g03658 909 FunFam Glutamate receptor 577 715 - -
Pumo4g03658 909 Pfam Receptor family ligand binding region 44 403 IPR001828 -
Pumo4g03658 909 SUPERFAMILY Periplasmic binding protein-like I 21 457 IPR028082 -
Pumo4g03658 909 FunFam Glutamate receptor 142 303 - -
Pumo4g03658 909 Gene3D - 577 705 - -
Pumo4g03658 909 Pfam Bacterial extracellular solute-binding proteins, family 3 477 806 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03658 Pumo-Chr4 75866818 75872710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03658 24 907 Ion Channels AT2G32400 57.978 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03658 K05387 - gmx:100796389 1686.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03658 4 75866818 75872710 Pumo4g03658 4 75866818 75872710 ECH
Pumo11g01199 11 41355328 41361024 Pumo4g03658 4 75866818 75872710 PCT