Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03644 ATGGACTCCATTTGCCCTATTGGGTTGCAGTGTGCCACTGAAATCTCTGCTCTTCTCTCTCCTCCCTCACCTCTTCAAGTTCAGGAATATTATCACAACCTTTTGTCTGCAAGAGGGTGCAGTGGTATCACAGTCAAACAGGATGGCAACTTTGGAAAAGGTTTATTTGCAGACATGGACTTCAAAGAGGGGGAACTGGTTCTGAAGGACCCCATGTTTGTAGGGGCTCAACATTCCCTCAACAAGATTGATTGTTTGGTGTGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAACTTCAAATTGGAAGGAGGCTTTACATGCAACAACTAAGGGCCAATGAGAGTCATGGTTGTGATGTGGGAAGCTCTTCAAAATACTGCCCTGAAATGGATTCTTCTGATGAAGAGGAGAGCACACAGCAATGTACTTCTGGTAGTTCCAAAACTAAAGTTCCTCTCCCCGAAGGTGTTGTGGAATCATTAATGAATGGCCAATTGGTGTTGCCTTTCTCCGAGAAGTTCTCCTTGCCGCCGGCTGTTCCATGCGCTGGTGGATGTGGAGAAGCTTACTATTGCAGCATGTCATGTGCAGAGGCTGATTGGGAATCCTCCCATTCTTTACTCTGTACTGGTGAGAGTTCTGATTCAGCTCATAGAGAGGCACTCCTTAAATTCGTCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCGAAGGCCATTTCTTCTACCATGTTAAAGTATCGCAAGTTAAAAGCAGTCAGTCTTGAAGAGCAAGTGAAACATGATACATCCTGTATTTCAAACCACTGTAACTTATCTATTCTTTTGGAAGCTTGGAGGCCTATATCGATGGGACACAAGAAAAGGTGGTGGGACTGTATTGCTTTGCCAGACGATGTTGATTCTTCTGATGAAGCTTCATTCAGGCTGCAAATAAAATTGTTGGCATTTGAGTCTCTCCAACTTCTTAAGACAGCCATATTTGACAAGGAATGTGAGCCATTATTCTCCCTTGAAATCTATGGAAATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGACATATCCTAATAAGGAAGAAGCTGAGAAAATTACGCAACCAATTCTGGATTCTCTTGGTGAAGAGTATTCTATTTATTGCGAAGGAACTGCATTTTTTCCTTTGCAAAGCTGCTTGAACCATTCCTGTTGTCCTAATGCCAAGGCTTTCAAAAGAGACGAGGATAAAGATGGCCAAGCAACAATAATTGCACAGAGGTCCATTTGTAAAGGAGAAGAGATAACCATATCATATGTTGATGAGGATCTTCCATTCGAAGAGAGACAGGCATCCCTTGCAGATTATGGCTTCAGATGCAGGTGTCCAAAGTGCATTGAAGAAGAGCCATAA 1455 0.4213 MDSICPIGLQCATEISALLSPPSPLQVQEYYHNLLSARGCSGITVKQDGNFGKGLFADMDFKEGELVLKDPMFVGAQHSLNKIDCLVCSFCFRFIGSIELQIGRRLYMQQLRANESHGCDVGSSSKYCPEMDSSDEEESTQQCTSGSSKTKVPLPEGVVESLMNGQLVLPFSEKFSLPPAVPCAGGCGEAYYCSMSCAEADWESSHSLLCTGESSDSAHREALLKFVKHANETNDIFLLAAKAISSTMLKYRKLKAVSLEEQVKHDTSCISNHCNLSILLEAWRPISMGHKKRWWDCIALPDDVDSSDEASFRLQIKLLAFESLQLLKTAIFDKECEPLFSLEIYGNIIGMFELNNLDLVVASPVEDYFLYIDDLTYPNKEEAEKITQPILDSLGEEYSIYCEGTAFFPLQSCLNHSCCPNAKAFKRDEDKDGQATIIAQRSICKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03644 484 Pfam SET domain 52 453 IPR001214 GO:0005515
Pumo4g03644 484 CDD SET_SMYD 393 479 - -
Pumo4g03644 484 Gene3D - 125 215 - -
Pumo4g03644 484 Pfam MYND finger 182 210 IPR002893 -
Pumo4g03644 484 Gene3D SET domain 375 483 IPR046341 -
Pumo4g03644 484 ProSiteProfiles SET domain profile. 41 454 IPR001214 GO:0005515
Pumo4g03644 484 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 483 IPR044237 GO:0008168
Pumo4g03644 484 SUPERFAMILY HIT/MYND zinc finger-like 185 211 - -
Pumo4g03644 484 MobiDBLite consensus disorder prediction 125 151 - -
Pumo4g03644 484 SUPERFAMILY SET domain 41 479 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo4g03644 SET 6.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03644 - - gmx:100803651 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03644 4 75590615 75603453 Pumo4g03644 4 75590615 75603453 ECH