Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03632 ATGTTTTCCGGCGACGGCTCCTCCATGGATCCCATGTTTTCCGGCGTGAGCCTGCAGTCTCTTCTTTCTCTGAATCCTTCCCTCTTGGCCGAGGGTGGCTTCCCCACCTTGGCCTCCCTAACCGACGACCCTCCCCTAATCTCCCAACGCTGGCCGGAGCACCCCGACCCGAAGCGCCAGCGTCTGGACTCCCCGGTGATCCCGCAGAGCAACCTGGCCCGGCAGCGGAGGCAGAAGCTGAGCGAGAAAACGCGGTGTCTCCAGAAGCTGATGCCGTGGGAGAAGAAAATGGACCAAGGGACCCTTCTAGAAGAAGCCTACAAGTACGTAAAGTTCCTGCAGGCACAGTCCCGCGTCCTCCACTCCATGCCCTCTCACTCTCACACCCTCCAAAACCAAAACGGCGGCGTTTTCGGCGACCTCGAGAAGCTGAACCGCAGTCAGGTCCTCCAGGTTCTCGTCAACTCCCCCGTCGCCCAAACCATCCTCTACTCCCAAGGCTTCTGCGTTTTCTCCCTCGAACAGTTGTCTCTCCTCAGGAAACTCTCCGATAAAAGGCAACAACACGTGGCGGATCCTGCTTCCTCCAAAACTTTCTTCAACTAA 606 0.5809 MFSGDGSSMDPMFSGVSLQSLLSLNPSLLAEGGFPTLASLTDDPPLISQRWPEHPDPKRQRLDSPVIPQSNLARQRRQKLSEKTRCLQKLMPWEKKMDQGTLLEEAYKYVKFLQAQSRVLHSMPSHSHTLQNQNGGVFGDLEKLNRSQVLQVLVNSPVAQTILYSQGFCVFSLEQLSLLRKLSDKRQQHVADPASSKTFFN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03632 201 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 56 181 IPR045843 GO:0003700|GO:0006355
Pumo4g03632 201 Gene3D - 69 134 IPR036638 GO:0046983
Pumo4g03632 201 SMART finulus 70 119 IPR011598 GO:0046983
Pumo4g03632 201 MobiDBLite consensus disorder prediction 45 80 - -
Pumo4g03632 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 113 IPR011598 GO:0046983
Pumo4g03632 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03632 Pumo-Chr4 75400870 75401475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03632 76 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 49.550 1.56e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pumo4g03632 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03632 - - gmx:102666676 279.256