Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03609 ATGTTTGAGAATACAATAGCTATCAAAAGAATCTTTGTATTAGACATGAGAACCGATCATCAGGTTCCGTTCTCCTTCTCCGTTGTTGTTTCTTTGATGCTATGCTTCCAAATCTGTTCCGCTGGAGATACTTTGAAGGCTGGCCAGAAGATAACAACTCTGGACTCGGCGGGGAACCTTGTTTCATCTAACCGCACATTTGAGCTTGGCTTCTTTTCTTCAAGTGGTAGCAGCAGTGTCAAAAGATACTTGGGGATATGGTATCATGAGTTGGACGAACCAGAACCACAAACAGTGGTATGGGTTGCCAATAGAGACGCGCCTGTTTCAGATTCCAGTGGAGTTTTCCGAATTGCAGAGGATGGAAATCTGGTGGTAGAAAGTGCGTCAAAAAGGTATTGGTCCTCTGAACTTGAAGAATCCTCCTCGTCCACAAACAGAACATTGAAGCTCCTAGATTCAGGGAACCTGGTACTAATGGACGATAACTCCGGAACGAGTTACCTGTGGCAGAGCTTCCAACATCCAACAGACACGTTCCTTCCTGGCATGAAAATGGATGCAAATTTAACGTTGACTTGTTGGAGAGACGCCACTGACCCGGCACCTGGGGACTTCACCTTTAAGCTGGCTCATAATAGTCACAGTCAAAACTTCGTTGTGGAAAAGCAATCACAACTTTATTGGACACTCGATGTATTTGATTTTAGATTCGCTAGGTTGTTGGAAAACGCCACCTCGGGTGATAAACCATACAATTTTTCAGGAGAAACGGTCTATCCATCCCGACATTACAGTTACAATAAATCAAGGCTATTAATGAATTATAGCGGGGAGATACAATTTCTCAAGTGGAATGAGGATGACTTGCAATGGGATAAGCGCTGGTCAGGGCCAGCTGACAAGTGCGACATACATAACTGTTGTGGGACCTTCAGCTTCTGTGACAAAAATAACTTGAATTTGAAACGGAAACAATATTGCAAATGTTTGCCAGGATTCAGTCCCACGCATGCTGAAGCCAAAGGGTGTGTCAGAAAATCAACATCGTGTATTGACAAGAAGGACGTGACGTTCCTCAACTTAACCAACATTAAAGTGGCTGATCACCCAGACCAACAATCCTTTGACGGAACAGAAGCAGAATGTCAATCCTTATGCCTTAACAATACCAACTGTTCTGAGCCCCAGTGCCAGGCATATTCATATAGTTCGACGTTATATGATCGTGATCACTCCTCTACGTGCAAGATCTGGAGACGAGATTTATCTACTCTTGTAGAGAAGTACGATCCTGTTCGTAATCTTTTTATCCTGGTTAAGAGATCAGATATAGTACCAACTCCAAAATCGTGTGAACCTTGCGGCATGTTCGTGATTCCTTATCCGCTAAGCACTGGGCCAAACTGTGGAGACCCCCTGTACAACAAATTCAATTGTAATAAATCGACAGGCCACGTTACCTTCATGATGCCGGGAGGAACATCATACCAAGTTACTTGGATCGATGAAGATACCAGAATGTTTTACATTCTAACAAATGGTTCATATTCCTGTAGTTCCAGCAATCAAAATAACACGCCTAATTTTCCATTTAATGTAGTTGAGCAGTGTTCTAAAGATGATGATGATGATGATGGAATGATTGAAATCAATTGGGTACCAGCACCAGAACCGCCCTGTAGTAAGCCTATAGACTGCATGAATTGGCCCCATTCAACATGCAAAGAAACAAGTGAAGGAGTAACCAGGTGCCATTGTGATTCACAATATAAATGGAATAACTCAATCTTTAGATGCACCCAAGAAGAGCATTCAACCAACCGACTGGCATTGATTCTTATAGTAATTCTTAGTGGCATGGCTATTCTGGCATGCATAATAGCATTTGCCATTGTGCGGAGAAAGAAAAAAGCTCATAAGCTTGGTCAGGCAAACACCCGAATTCAGGAGAGCTTGTACGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAAGGACATTGAAGGCATTGAAGTACCCTGTTATACTTATGCAAGCATTGTAGCAGCTACAGATAATTTCTCAGATCCTAACAAGCTTGGAAGAGGAGGCTATGGGCCTGTCTATAAGGGAAAGTTTCCTGGAGGTCAAGATATAGCTGTAAAGAGGCTTTCAAGTGTTTCAACTCAAGGCTTACAGGAATTCAAGAACGAGGTTATTTTGATTGCAAAACTTCAACATCGGAACCTTGTTAGACTTAGGGGCTATTGCATAAAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGACTCGAACTTTACTCCTGGATTGGCCAAAGCGGTTTGAGATAATTGTAGGCATTGCACGTGGCTTGCTCTATCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACTTGAAAACCAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGTCTTGCCAAAATATTTGGGGAAAAAGAAACTGAAGCAAGTACAGAGAGAGTTGTGGGAACCTATGGATATATGGCTCCAGAGTATGCCTTGGATGGACTTTTTTCAATCAAATCCGATGTTTTTAGCTTTGGAGTAGTCCTTCTAGAGATTCTTAGTGGAAAAAGGAACACTGGATTCTATCAGTCCAAACAAATTTCTAGCCTTTTGGGTTATGTATGTTTTTTGTGTTGCACTTTTGGGTTATGTATGTTTCTGTGA 2775 0.4169 MFENTIAIKRIFVLDMRTDHQVPFSFSVVVSLMLCFQICSAGDTLKAGQKITTLDSAGNLVSSNRTFELGFFSSSGSSSVKRYLGIWYHELDEPEPQTVVWVANRDAPVSDSSGVFRIAEDGNLVVESASKRYWSSELEESSSSTNRTLKLLDSGNLVLMDDNSGTSYLWQSFQHPTDTFLPGMKMDANLTLTCWRDATDPAPGDFTFKLAHNSHSQNFVVEKQSQLYWTLDVFDFRFARLLENATSGDKPYNFSGETVYPSRHYSYNKSRLLMNYSGEIQFLKWNEDDLQWDKRWSGPADKCDIHNCCGTFSFCDKNNLNLKRKQYCKCLPGFSPTHAEAKGCVRKSTSCIDKKDVTFLNLTNIKVADHPDQQSFDGTEAECQSLCLNNTNCSEPQCQAYSYSSTLYDRDHSSTCKIWRRDLSTLVEKYDPVRNLFILVKRSDIVPTPKSCEPCGMFVIPYPLSTGPNCGDPLYNKFNCNKSTGHVTFMMPGGTSYQVTWIDEDTRMFYILTNGSYSCSSSNQNNTPNFPFNVVEQCSKDDDDDDGMIEINWVPAPEPPCSKPIDCMNWPHSTCKETSEGVTRCHCDSQYKWNNSIFRCTQEEHSTNRLALILIVILSGMAILACIIAFAIVRRKKKAHKLGQANTRIQESLYESERHVKGLIGLGSLEEKDIEGIEVPCYTYASIVAATDNFSDPNKLGRGGYGPVYKGKFPGGQDIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPKRFEIIVGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGEKETEASTERVVGTYGYMAPEYALDGLFSIKSDVFSFGVVLLEILSGKRNTGFYQSKQISSLLGYVCFLCCTFGLCMFL 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03609 924 Gene3D Phosphorylase Kinase; domain 1 668 769 - -
Pumo4g03609 924 Gene3D Transferase(Phosphotransferase) domain 1 770 914 - -
Pumo4g03609 924 SMART blect_4 53 176 IPR001480 -
Pumo4g03609 924 ProSiteProfiles Protein kinase domain profile. 694 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03609 924 ProSiteProfiles PAN/Apple domain profile. 351 443 IPR003609 -
Pumo4g03609 924 PIRSF SRK 564 919 IPR024171 GO:0004674
Pumo4g03609 924 PIRSF SRK 16 454 IPR024171 GO:0004674
Pumo4g03609 924 PIRSF SRK 484 596 IPR024171 GO:0004674
Pumo4g03609 924 SUPERFAMILY Protein kinase-like (PK-like) 677 904 IPR011009 -
Pumo4g03609 924 SMART serkin_6 694 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03609 924 CDD B_lectin 60 176 IPR001480 -
Pumo4g03609 924 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 200 IPR036426 -
Pumo4g03609 924 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 28 920 - -
Pumo4g03609 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Pumo4g03609 924 Pfam D-mannose binding lectin 98 190 IPR001480 -
Pumo4g03609 924 Pfam Protein tyrosine and serine/threonine kinase 698 896 IPR001245 GO:0004672|GO:0006468
Pumo4g03609 924 CDD STKc_IRAK 700 894 - -
Pumo4g03609 924 FunFam Lectin-domain containing receptor kinase A4.3 770 916 - -
Pumo4g03609 924 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 661 769 - -
Pumo4g03609 924 SMART ntp_6 354 442 IPR003609 -
Pumo4g03609 924 CDD PAN_AP_plant 353 440 - -
Pumo4g03609 924 Pfam S-locus glycoprotein domain 264 337 IPR000858 GO:0048544
Pumo4g03609 924 ProSiteProfiles Bulb-type lectin domain profile. 45 172 IPR001480 -
Pumo4g03609 924 Gene3D - 37 174 IPR036426 -
Pumo4g03609 924 FunFam Receptor-like serine/threonine-protein kinase SD1-8 37 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03609 Pumo-Chr4 74972931 74978079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03609 669 911 Receptor kinase-like Gene Family AT4G05200 58.848 5.56e-97 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03609 PK_Tyr_Ser-Thr 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03609 - - gmx:100817898 1412.9