Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03605 ATGAGGAACCCATGGTTCTGCATCTCTCTTCTCACCCTTTTCTTCTCTTTGTTCACCCATCCTTCCCTTGCAGCTCTCACAACCGTTTCAACAAACCAAGCTCTCACTGGGGATCAAACCCTCGTCTCCAAAGGTGAAATCTTCGAACTGGGTTTCTTCAAGCCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTTACCATACAAACAATAGTTTGGGTAGCAAATAGAGACAACCCTGTCTCTGATAAGAACACTGCCACGTTAACAATATCGGGTGGTAATTTAGTTCTCTTAGATGGGTCTTTAAATCAAGTTTGGTCAACAAACATAACTTCTCCCAGGTCAGGTTCTGCCGTAGTAGTTGTTCTCCTAGATTCTGGGAATCTTGTGTTAACAGATAGGCCTAATGACGCTTCTGCTTCAGATTCTCTGTGGCAGAGTTTTGATCACCCAACTGACACGTGGCTTCCCGGTGGCAAAATTAAACTCGACAACAAAACGAAGCGACCTCAATACCTCACTTCATGGAAGAACAACGAAGATCCTGCGATGGGTCTTTTTTCTCTGGAACTAGACCCCAAAGGAACAACCTCTTATTTGATTCTTTGGAACAAGTCCGAAGAGTATTGGACAAGTGGTCCTTGGAATGGACACATTTTCAGCTTGGTTCCCGAGATGAGGGCGAATTATATCTACAATTTCTCGTTTGTGTCGAACAAGAACGAGAGCTATTTCACCTACTCCTTGTATAACTCGTCCATTATATCGCGGTTTGTGATGGATGTCTCGGGGCAGATCAAGCAACTCTCGTGGCTGGAAACTGCTCAGCAGTGGAACTTGTTTTGGTCACAACCGAGACAACAGTGCGAGGTATATGCCTTTTGCGGTGCGTTTGGGAGCTGCACTGAAAACTCGATGCCATATTGTAATTGTTTAACTGGTTTTGAGCCAAAGTCACTATCTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTGAGAGGAAAACCAAGTTGCAGTGCGAGAATTTGAATCCCTCTAACGGGGATAAGGACAGGTTTCTTGCAATTCCAAACATGGTGTTACCTAAACATGCACAATCTGTGGGGTCAGGGAATGCAGAGGAATGTGAATCAATTTGCTTGAACAATTGTTCCTGCACAGCTTATACATTTGATAGTAACGGGTGTTCGATTTGGTTAGGCAACCTTCTGAATCTGCAACAGTTATCTGCGGATGATAGTAGTGGAGAAACTTTGTATGTCAAACTTGCAGCATCTGAGTTTCATGATGGTAAAAACAGTAACGGGACTATTATTGGTGTGGTTGTGGGAGTGGTTGTTGGCATTGGGGTTCTCTTGGCAATTCTTTTGTTTTTCGTGATTAGGCGAAGGAAGAGAATGGTTGGAGCAGGAAAGCCTGTGGAGGGTTCGTTGGTGGCATTTGGGTACAGAGAATTGCAAAATGCAACGAGGAATTTCTCTGAGAAATTGGGAGGAGGAGGGTTTGGTTCTGTTTTCAAAGGAACGTTGGGTGATTCCAGTGTGGTAGCAGTGAAGAAGTTGGAAAGTATTAGCCAAGGAGAGAAACAGTTCCGTACAGAAGTTAGCACAATAGGGACAGTGCAACATGTTAACCTTGTTAGGCTCCATGGATTCTGCTCTGAAGGTGCCAAAAGGTTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATTTGTTCCAAAACAAGAACTCTAAGGTGTTGGATTGGAAAATGAGATACCAAATTGCCTTGGGAACAGCAAGGGGATTAACTTACCTTCATGAGAAGTGTAGAGATTGTATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTAGATGCTGAATTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGATTTCAGCAGGGTTCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTGTCACAGCCAAAGCTGATGTTTACAGCTATGGAATGATGCTGTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAGCCATCAGAAGATGGAAAAGTAACCTTCTTTCCTACCTTTGCTGCAAATGTTGTTGTCCAAGGTGGCAGTGTTGTTAGCCTTTTGGACCCTAGTTTGGAGGGTAATGCTGACATTGAGGAGGTGACTAGAATAATAAAAGTTGCTTCGTGGTGTGTTCAAGACAATGAGACTAACCGGCCAAGCATGGGTCAAGTGGTTCAAATCCTTGAAGGGATCTTAGAGGTGAATTTGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGTTGACAACCAGGAGAGTTTAGTTTTCTACACCGACTCGAACTCCACCAAGAGTTCACAAGTGAAGAGCAATGTCTCAACGACCTCCTCCTCTAAAGCTAGAAGTAACATCTCTTCAGCAAGCTCCAAGTCCTTGGGAGGAGAAAATTAG 2502 0.4404 MRNPWFCISLLTLFFSLFTHPSLAALTTVSTNQALTGDQTLVSKGEIFELGFFKPGNSSNYYIGIWYKKVTIQTIVWVANRDNPVSDKNTATLTISGGNLVLLDGSLNQVWSTNITSPRSGSAVVVVLLDSGNLVLTDRPNDASASDSLWQSFDHPTDTWLPGGKIKLDNKTKRPQYLTSWKNNEDPAMGLFSLELDPKGTTSYLILWNKSEEYWTSGPWNGHIFSLVPEMRANYIYNFSFVSNKNESYFTYSLYNSSIISRFVMDVSGQIKQLSWLETAQQWNLFWSQPRQQCEVYAFCGAFGSCTENSMPYCNCLTGFEPKSLSDWNLEDHSGGCERKTKLQCENLNPSNGDKDRFLAIPNMVLPKHAQSVGSGNAEECESICLNNCSCTAYTFDSNGCSIWLGNLLNLQQLSADDSSGETLYVKLAASEFHDGKNSNGTIIGVVVGVVVGIGVLLAILLFFVIRRRKRMVGAGKPVEGSLVAFGYRELQNATRNFSEKLGGGGFGSVFKGTLGDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLHGFCSEGAKRLLVYDYMPNGSLDFHLFQNKNSKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDAEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAVTAKADVYSYGMMLFEFVSGRRNSEPSEDGKVTFFPTFAANVVVQGGSVVSLLDPSLEGNADIEEVTRIIKVASWCVQDNETNRPSMGQVVQILEGILEVNLPPIPRSLQVFVDNQESLVFYTDSNSTKSSQVKSNVSTTSSSKARSNISSASSKSLGGEN 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03605 833 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Pumo4g03605 833 Pfam PAN-like domain 353 410 IPR003609 -
Pumo4g03605 833 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Pumo4g03605 833 PANTHER OS07G0415500 PROTEIN 8 778 - -
Pumo4g03605 833 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Pumo4g03605 833 SUPERFAMILY Hairpin loop containing domain-like 354 403 - -
Pumo4g03605 833 CDD STKc_IRAK 502 769 - -
Pumo4g03605 833 SMART serkin_6 496 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03605 833 CDD PAN_AP_plant 341 429 - -
Pumo4g03605 833 Pfam Protein kinase domain 499 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03605 833 Gene3D Phosphorylase Kinase; domain 1 464 570 - -
Pumo4g03605 833 SMART blect_4 32 156 IPR001480 -
Pumo4g03605 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Pumo4g03605 833 FunFam Receptor-like protein kinase 4 464 570 - -
Pumo4g03605 833 Gene3D Transferase(Phosphotransferase) domain 1 571 774 - -
Pumo4g03605 833 CDD B_lectin 35 156 IPR001480 -
Pumo4g03605 833 FunFam Serine/threonine-protein kinase 571 774 - -
Pumo4g03605 833 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Pumo4g03605 833 Pfam D-mannose binding lectin 74 182 IPR001480 -
Pumo4g03605 833 MobiDBLite consensus disorder prediction 800 833 - -
Pumo4g03605 833 Gene3D - 23 153 IPR036426 -
Pumo4g03605 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 153 - -
Pumo4g03605 833 SUPERFAMILY Protein kinase-like (PK-like) 482 794 IPR011009 -
Pumo4g03605 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 221 IPR036426 -
Pumo4g03605 833 SMART ntp_6 353 428 IPR003609 -
Pumo4g03605 833 PIRSF SRK 1 818 IPR024171 GO:0004674
Pumo4g03605 833 ProSiteProfiles Protein kinase domain profile. 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03605 Pumo-Chr4 74907732 74910519 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03605 452 776 Receptor kinase-like Gene Family AT5G20050 41.944 3.17e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo4g03605 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03605 - - gmx:100810583 1352.81