Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03603 ATGTACAACATGAGAAACCCATGGTTCTGCCTCTCTCTTCTCACCCTCTTTTTCTCTTTGTTCACCCACAATTCTGTTGCAGCTCTCTCCACCGTCTCTGCAAGCCAAACTCTCACTGGGGATCAAACTCTCGTCTCAGAAGGTGGGGTCTTCGAACTGGGTTTCTTCAAGCCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACCATACAAACAATAGTTTGGGTAGCAAATAGAGACAACCCCGTCTCTGATAAGAACACTGCCACGTTAAGAATATTGGGTGGTAATGTAGTTCTCTTAGATGGGTCTTCAAATCAAGTTTGGTCAACAAACATAACTTCTCCCAGGTCAGGTTCTGTTGTAGTAACTGTTCTCCTAGATTCTGGGAATCTTGTGTTAACAGATAGGCCTAATGATGCTTCTGCTTCAGATTCTCTGTGGCAGAGTTTTGATCACCCAACTGACACGTTCCTTCCGGGTGGCAAAATTAAACTGGACAATAAAACAAAGCAACCTCAATACCTCACTTCATGGAAGAATTTTGAGAATCCTGCTACGGGTCTATTCTCTCTGGAACTAGACCCCAAAGGATCCACTGCTTATTTAATTACTTGGAACAAGTCTGAAGAGTATTGGACAAGTGGTCCTTGGAATGGACACATTTTCAGTTTGGTTCCCGAGATGAGGTTGAATTATATCTACTATTTCACGTTTGTGTCGAACGAGAACGAAAGCTATTTCACCTACTCCTTGTATAACTCGTCCATTATATCGCGGTTTGTGATAGATGTCTCGGGGCAGATCAAGCAACTCTCGTGGTTGGAAAATGCTCAGCAATGGAACTTGTTTTGGTCTCAGCCGAGACAACAGTGTGAGGTATATGCCTTTTGCGGTGCGTTTGGGAGCTGCACTGAAAACTCGATACCGTATTGTAATTGTTTAACTGGTTTTGTGCCAAAGTCACTGTCTGATTGGAATCTGGAGGATTACTCAGGTGGGTGTGAAAGGAAAACCAAGTTGCAATGCGAGAATTCCAATCCCTTTAACGGTGATAAGGACGGCTTCATAGCAATTCCCAACATGGTATTACCTAAACATGCACAATCTGTAGGATCAGGAAATGTAGGGGAATGTGAATCAATCTGCTTGAACAGCTGCTCCTGCACAGCTTATGCATTTGACAGTAACGGGTGTTCAATTTGGTTTGGCGACCTTCTGAGTGTGCAACAGTTATCTCAAGATGATAGTAGCGGACAAACTTTGTATGTCAAACTTGCAGTATCTGAGTTTCATAATGGTAAAAACAGAATTGGGATGATTATTGGTGTGGTTGTGGGCGTGGTTGTTGGCATTGGTGTTCTCTTGGCCCTTCTTCTGTATGTCAAGATTAGGCGCAGAAAGAGAATGGTTGGAGCAGTGGAGGGTTCATTGGCGGCATTTGGGTACAGAGATTTGCAAAATGCAACGAACAATTTCTCTGAGAAATTGGGAGAAGGAGGGTTTGGTTCTGTTTTCAAAGGAACACTGGGTGACTCCAGTGTGGTAGCAGTGAAGAAGTTTGAAAGTAGTAGCCAAGTAGAGAAACATTTCCGAGGAGAAATCACTACAATAGGGAAAGTACACCATGTTAATCTCGTTAGGCTCCGTGGATTCTGCTCCGAAGGTACCAAAAGGCTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATCTGTTCCAGAACAAGAACTTTAAGGTGTTGGACTGGAAAACGAGATACCAAATTGCCTTGGGAACAGCAACGGGATTGGCTTACCTTCATGAGAAATGTAGAGACTGTATTATACACTGTGATGTAAAGCCAGGAAACATTCTCCTAGATGCTGATTTTTGTCCCAAGGTTGCAGACTTTGGCCTAGCTAAGCTGGTTGGAAGGGATTTCAGCAGGGTGCTCACAGCATTTGGAGGAACAAAAAACTATATTGCTCCAGAATGGATATCTGGGGTGCCTATCACAGCCAAAGTTGATGTGTACAGCTATGGGATGATGCTTTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAGCCATGTGAAGGTGGCCAATTTACCTTCTTTCCTACCTGGGCAGCAAACGTTGTTGCCCAAGGTGGCAATGTTCTTAGCCTTTTGGATCCTAGTTTGGAGGGAAACGCTGACACTGAAGAGGTGACTCGATTGACAACAGTTGCATCGTGGTGTGTCCAAGAAAATGAGACTCAACGGCCAACCATGGGTCAGGTAGTTCATATCCTTGACGGAATCTTGGACGTGAATTTACCTCCCATTCCAAGATCTCTTCAAATGTTTGTTGACAACTAG 2364 0.4374 MYNMRNPWFCLSLLTLFFSLFTHNSVAALSTVSASQTLTGDQTLVSEGGVFELGFFKPGNSSNYYIGIWYKKVTIQTIVWVANRDNPVSDKNTATLRILGGNVVLLDGSSNQVWSTNITSPRSGSVVVTVLLDSGNLVLTDRPNDASASDSLWQSFDHPTDTFLPGGKIKLDNKTKQPQYLTSWKNFENPATGLFSLELDPKGSTAYLITWNKSEEYWTSGPWNGHIFSLVPEMRLNYIYYFTFVSNENESYFTYSLYNSSIISRFVIDVSGQIKQLSWLENAQQWNLFWSQPRQQCEVYAFCGAFGSCTENSIPYCNCLTGFVPKSLSDWNLEDYSGGCERKTKLQCENSNPFNGDKDGFIAIPNMVLPKHAQSVGSGNVGECESICLNSCSCTAYAFDSNGCSIWFGDLLSVQQLSQDDSSGQTLYVKLAVSEFHNGKNRIGMIIGVVVGVVVGIGVLLALLLYVKIRRRKRMVGAVEGSLAAFGYRDLQNATNNFSEKLGEGGFGSVFKGTLGDSSVVAVKKFESSSQVEKHFRGEITTIGKVHHVNLVRLRGFCSEGTKRLLVYDYMPNGSLDFHLFQNKNFKVLDWKTRYQIALGTATGLAYLHEKCRDCIIHCDVKPGNILLDADFCPKVADFGLAKLVGRDFSRVLTAFGGTKNYIAPEWISGVPITAKVDVYSYGMMLFEFVSGRRNSEPCEGGQFTFFPTWAANVVAQGGNVLSLLDPSLEGNADTEEVTRLTTVASWCVQENETQRPTMGQVVHILDGILDVNLPPIPRSLQMFVDN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03603 787 FunFam serine/threonine-protein kinase PBS1-like 467 570 - -
Pumo4g03603 787 SMART serkin_6 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03603 787 PIRSF SRK 2 787 IPR024171 GO:0004674
Pumo4g03603 787 SMART blect_4 35 159 IPR001480 -
Pumo4g03603 787 CDD B_lectin 35 159 IPR001480 -
Pumo4g03603 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 776 - -
Pumo4g03603 787 Pfam PAN-like domain 356 414 IPR003609 -
Pumo4g03603 787 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Pumo4g03603 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 224 IPR036426 -
Pumo4g03603 787 PANTHER OS07G0415500 PROTEIN 10 778 - -
Pumo4g03603 787 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Pumo4g03603 787 CDD STKc_IRAK 502 769 - -
Pumo4g03603 787 Gene3D Phosphorylase Kinase; domain 1 465 570 - -
Pumo4g03603 787 Pfam Protein kinase domain 499 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03603 787 CDD PAN_AP_plant 344 432 - -
Pumo4g03603 787 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Pumo4g03603 787 ProSiteProfiles Protein kinase domain profile. 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03603 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 156 - -
Pumo4g03603 787 SMART ntp_6 356 431 IPR003609 -
Pumo4g03603 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Pumo4g03603 787 Gene3D Transferase(Phosphotransferase) domain 1 571 774 - -
Pumo4g03603 787 Pfam D-mannose binding lectin 77 185 IPR001480 -
Pumo4g03603 787 Gene3D - 25 157 IPR036426 -
Pumo4g03603 787 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Pumo4g03603 787 SUPERFAMILY Protein kinase-like (PK-like) 484 781 IPR011009 -
Pumo4g03603 787 SUPERFAMILY Hairpin loop containing domain-like 357 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03603 Pumo-Chr4 74900087 74902966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03603 439 773 Receptor kinase-like Gene Family AT1G56120 45.217 1.79e-74 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo4g03603 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03603 - - gmx:102667456 1376.3