Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03601 ATGTACAACATGAGAAACCCATGGTTCTGCCACTCTCTTCTCACCCTCCTTTTCTCTTTGTTCACCCACAATTCCCTTGCAGCTCTCACCACCGTTTCAACAAACCAAACTCTCACTGGGGATCAAACCCTCGTCTCCAAAGGTGAAATCTTCGAACTGGGTTTCTTCAAACCAGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACGATACAAACAATAGTTTGGGTAGCAAATAGAGACAACCCTGTCTCTGATAAGAACACTGCCACGTTAACAATATCGGGTGGTAATTTAGTTCTCTTAGATGGGTCTTCAAATCAAGTTTGGTCAACAAACATAACTTCTCCCAGGTCAAGTTCTGTTGTAGTAGCTGTTCTCCTAGATTCTGGGAATTTTGTGTTAACAGATAGGCCTAATGATGCTTCTGCTTCAGATTCTCTGTGGCAGAGTTTTGATCACCCAACTGATACGTTCCTTCCGGGTGGCAAAATTAAACTGGACAGTAAAACAAAGCAACCTCAATACATCACTTCATGGAAGAATTTTGAGAATCCTGCTACGGGTCTATTCTCTCTGGAACTAGACCCCAAAGGATCCACGGCTTATTTAATTACTTGGAACAAGTCTGAAGAGTATTGGACAAGTGGTCCTTGGAATGGACAAATTTTCAGTTTGGTTCCCGAGATGAGGTTGAATTATATCTTCAATTACACGTTTCAGTCAAACGAGAATGAGAGCTATTTCACCTACTCCTTGTATAACTCTTCCATTATATCTCGGCTTGTGATGGATGTCTCGGGGCAGATCAAGCAACTCTCGTGGTTGGAAAATGCTCAGCAATGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATATGCCTTTTGCGGTGCGTTTGGAAGCTGCACTGAAAACGCCATGCCGTATTGTAACTGTTTGAAGGGTTTCGAGCCAAAGTCATCGTTTGATTGGAATCTGATGGATTATTCAGGTGGGTGTGAAAGGAAAACCAAGTTGCAATGCGAGAATTCCAATCCCTTTAACGGGGATAAGGACAGGTTCGTAGCAATTTCCAACATGGCGTTACCTAAACATGATCAATCTGTGGTATCAGGGAATGTAGGGGAATGTGAATCAATCTGCTTGAGCAACTGCTCCTGCACAGCTTATGCATCTGACAGTAACGAGTGTTCAATTTGGTTTGGCGACCTTCTGAATGTGCAACAGTTATCTCAAGATGATAGTAGCGGACAAACTTTGTATGTCAAAATTGCAGCATCTGAGTTCCATGATGGTAAAAACATAATTGGGATAATTATTGGTGTGGTTGTGGGCGGGGTTGTTGGCATTGTTTTTGTCTTGGCCCTTCTTCTGTATGACAAGATCAGGCGAAGAAAGAGAATGGTTGGAGCAGTGGAGGGTTCATTGGTGGCATTTGGGTACAGAGATTTGCAAAACGCAACGAAGAATTTCTCTGAGAAATTGGGAGAAGGAGGGTTTGGTTCTGTTTTCAAAGGAACATTGGGTGACTCCAGTGTGGTAGCCGTGAAGAAGTTGAAAAGTATTAGCCAAGTAATAGAGAAACATTTCCAAACAGAAATTACTACAATAGGGAAAGTACAGCATGTTAATCTCGTTAGGCTCTGTGGATTCTGCTCCGAAGGTACCAAAAGGCTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGAATTTCCATCTGTTCCAGAACAAGAACTCTAAGGTGTTGGACTGGAAAACCAGATACCAAATTGCGTTGGGAACAGCAAGGGGACTAGCTTACCTTCACGAGAAGTGCAGAGACTGTATTATACACTGTGATGTAAAGCCAGAAAATATTCTCCTAGATGCTGATTTTTGTCCCAAGGTTGCAGACTTTGGCCTAGCTAAGCTGGTTGGAAAGGATTTCAGCAGGGTCCTCACAGCAGTTAGAGGAACAAAAAACTATATTGCTCCAGAATGGATTTCTGGGGTGCCTATCACAGCCAAAGTTGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCAGGTAGGAGGAACTCTGAGCCGTGTGAAGGTGGCCAATTTACCTTCTTTCCTACTTGGGCAGCAAACGTAGTTGCCCAAGGTAGCAATGTTCTTAGCCTTTTGGATCCTAGTTTGGAGGGAAACGCTGACACTGAAGAGGTGACTCGAATGACAATAGTTGCATCGTGGTGTGTCCAAGAAAATGAGACTCAGCGGCCAACTATGGGTCAGGTAGTTGATATCCTTGACGGAATCTTAGAGGTGAATTTACCTCCCGTTCCAAGAGCTCTTCAAGTGTTTGTTGACAACTAG 2367 0.4313 MYNMRNPWFCHSLLTLLFSLFTHNSLAALTTVSTNQTLTGDQTLVSKGEIFELGFFKPGNSSNYYIGIWYKKVTIQTIVWVANRDNPVSDKNTATLTISGGNLVLLDGSSNQVWSTNITSPRSSSVVVAVLLDSGNFVLTDRPNDASASDSLWQSFDHPTDTFLPGGKIKLDSKTKQPQYITSWKNFENPATGLFSLELDPKGSTAYLITWNKSEEYWTSGPWNGQIFSLVPEMRLNYIFNYTFQSNENESYFTYSLYNSSIISRLVMDVSGQIKQLSWLENAQQWNLFWSQPRQQCEVYAFCGAFGSCTENAMPYCNCLKGFEPKSSFDWNLMDYSGGCERKTKLQCENSNPFNGDKDRFVAISNMALPKHDQSVVSGNVGECESICLSNCSCTAYASDSNECSIWFGDLLNVQQLSQDDSSGQTLYVKIAASEFHDGKNIIGIIIGVVVGGVVGIVFVLALLLYDKIRRRKRMVGAVEGSLVAFGYRDLQNATKNFSEKLGEGGFGSVFKGTLGDSSVVAVKKLKSISQVIEKHFQTEITTIGKVQHVNLVRLCGFCSEGTKRLLVYDYMPNGSLNFHLFQNKNSKVLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLVGKDFSRVLTAVRGTKNYIAPEWISGVPITAKVDVYSYGMMLFEFVSGRRNSEPCEGGQFTFFPTWAANVVAQGSNVLSLLDPSLEGNADTEEVTRMTIVASWCVQENETQRPTMGQVVDILDGILEVNLPPVPRALQVFVDN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03601 788 CDD STKc_IRAK 502 770 - -
Pumo4g03601 788 SMART blect_4 35 159 IPR001480 -
Pumo4g03601 788 Pfam PAN-like domain 356 414 IPR003609 -
Pumo4g03601 788 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Pumo4g03601 788 Gene3D - 26 157 IPR036426 -
Pumo4g03601 788 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Pumo4g03601 788 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Pumo4g03601 788 SUPERFAMILY Protein kinase-like (PK-like) 483 781 IPR011009 -
Pumo4g03601 788 SMART serkin_6 496 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03601 788 FunFam Serine/threonine-protein kinase 24 156 - -
Pumo4g03601 788 CDD PAN_AP_plant 344 432 - -
Pumo4g03601 788 PANTHER OS07G0415500 PROTEIN 10 779 - -
Pumo4g03601 788 Pfam D-mannose binding lectin 77 185 IPR001480 -
Pumo4g03601 788 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Pumo4g03601 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 777 - -
Pumo4g03601 788 Pfam Protein kinase domain 499 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03601 788 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Pumo4g03601 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 224 IPR036426 -
Pumo4g03601 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pumo4g03601 788 FunFam S-receptor-like serine/threonine-protein kinase 467 571 - -
Pumo4g03601 788 CDD B_lectin 35 159 IPR001480 -
Pumo4g03601 788 SMART ntp_6 356 431 IPR003609 -
Pumo4g03601 788 ProSiteProfiles Protein kinase domain profile. 496 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03601 788 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Pumo4g03601 788 PIRSF SRK 3 788 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03601 Pumo-Chr4 74892145 74895269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03601 439 774 Receptor kinase-like Gene Family AT1G56120 45.507 1.56e-75 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo4g03601 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03601 - - gmx:102667456 1367.83