Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03588 ATGGCAGTTCTTAGAGAACACAAACTTGTTGAAAATTTTCAGGTTGGTCCAGCAGTGAAAACAACCACCTCTCTTCCCCTCACATTCCTTGATTTGCCATTAGCAGGTCCTATTTATGTGAGACGGCAATTCTTCTATAACTTCCCCCATTCCACACTCCATTTCTATGAAACCACACTTCCTTCTCTCAAAACCTCTCTCTCTCAAACCCTTCAACACTTCTTCCCTCTCGCTGGAAATCTCCTCTGTCCTCCACCACCCCACAAACCCTTCATTCGCTGCACCCATGATGACTATGTCACCTTAACCGTCATCGAGTCCAAAGATGATTTCAACTACCTCTCATCCAACCACCCCAAAAGCCTCAAAGATTTGGATCATTTGGTTCCAAAGTTGACATGCACAACCATGCATGAAGACACGTTCATTTTCCCATTGGTGGCCTTGCGAGTCACGGTTTTCCCCAACCGTGGCCTTTGCATCGCGATCACGTATTGCCACGTGATGGATGATAGTTGTTGCAGCCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAGTGGTGGAGTTGATTTGACTCTTGTGGAGAAGTCACGACCGTGCTTTGATAGGGAAGTGTTGAAGGACCCCAAAGGACTCGAAGCCATCTTCTTGAGAGATTATTTAGAAGAGAGGTCAACTTGGAAAGACAAACTCGTTGGTACAACTTCTGATATTTCTGGTGGAAATGAAGATTATGTCAAAGCAACGATTGTTTTTGGAAAAGATGATATCGAGGGGCTAAGAAGATGGGTGCTGAATCAGTGGAAGAAAAGTGAGGAGGAATTCGTCACGCCACAATACCTATCAAAATTTGTGGTGACATGTGCTTTTGTTTGGGCTTGTATGGTTAAAACAAGATGCAGAAATGATGATGATGAGGATGATGTCAAAGAGGAGGAGTACTTTTTTTTCGCTGCAAATTGCAGAGATCGCCTTGAGCATCCTGTGCCAAAAACTTACTTTGGAAACTGCTTAACGCTATGTTCTGCAATGCTCAAGAGAAAGGACCTAAAGGGAGAAGGTGGTTTTGTGAATGCGGTTAAGGTCATTGAAAGGGAATTGACTGATACGAAAAGTGATCTCTTCAAAGATGCAGAAACCTGGAGGGCATCATTTACGAAGATGTTTGTGTTGGAAAGTACCTTGATAATTACAGGGTCACCCAAGTTCACTGTTTATGAGACTGATTTTGGATTAGGAAGGCCTACCAAAGTGGAAATGGTACATTCCTACAAGGGTATGTCTCTAGCCGAAAGTGGAGATGAGGAAGGAGGACTTGAGGTTGGGTTGGTGTGCACAAGTACAGAATTTGAATATTTAAATTCTGTCATTGAACAAGGACTTCGAGTTTCAAAATCCTAA 1404 0.4309 MAVLREHKLVENFQVGPAVKTTTSLPLTFLDLPLAGPIYVRRQFFYNFPHSTLHFYETTLPSLKTSLSQTLQHFFPLAGNLLCPPPPHKPFIRCTHDDYVTLTVIESKDDFNYLSSNHPKSLKDLDHLVPKLTCTTMHEDTFIFPLVALRVTVFPNRGLCIAITYCHVMDDSCCSHFMKSWSSICRSGGVDLTLVEKSRPCFDREVLKDPKGLEAIFLRDYLEERSTWKDKLVGTTSDISGGNEDYVKATIVFGKDDIEGLRRWVLNQWKKSEEEFVTPQYLSKFVVTCAFVWACMVKTRCRNDDDEDDVKEEEYFFFAANCRDRLEHPVPKTYFGNCLTLCSAMLKRKDLKGEGGFVNAVKVIERELTDTKSDLFKDAETWRASFTKMFVLESTLIITGSPKFTVYETDFGLGRPTKVEMVHSYKGMSLAESGDEEGGLEVGLVCTSTEFEYLNSVIEQGLRVSKS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03588 467 Gene3D - 243 465 IPR023213 -
Pumo4g03588 467 Gene3D - 7 233 IPR023213 -
Pumo4g03588 467 PANTHER - 8 463 - -
Pumo4g03588 467 Pfam Transferase family 17 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03588 Pumo-Chr4 74688151 74689554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03588 19 452 Monolignol Biosynthesis Gene Families AT5G48930 22.078 2.78e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03588 - - gmx:100814180 816.609