Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03574 ATGAAGATTGCTTCCTTCTTCTCCAAGGCTTTCCACGGCTTACCTTCATGCTACAAGCTTGTGCTCCTCTGCACTCTAAGTGGTGGAGGTGTGGTGTTATACTCAGAATCACGATCTGATGCTAAACCTCCTGCTCCTAGTATTGGTACTAATGAGCGCAAGAAAAAGAAGTTGTTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTCGATGCTTCCTTGTATGATGTTCAGGTTGTATCCCCTCGTAACTACTTTGCATTCACTCCTTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCTAGGAGCATTGTAGAGCCAGTCAGAAACATCATAAAAAAGAGAAAAGGAGAAATTAAATTTTGGGAGGCAGAATGCCTGAAGATTGATTCTGCAAACAAAAAGGTTATATGTATGTCCAATATTGACAACAACTTAGTGGGAAATGGTGAATTTTCTTTGGATTATGACTACTTGGTTATAGCAATTGGAGCACAAGTAAATACATTTAACACTCCTGGTGTCATGGAGAATTGTTATTTTCTGAAGGAGGTAGAGGATGCTCAGAAGATCAGACAGTCTGTGATAGATTGCTTTGAGAAGGCGGTGCTTCCATCTCTATCTGAAGAAGAACGAAGGACGAATCTGCATTTTATAGTTGTTGGAGGGGGTCCAACTGGTGTGGAATTTGCTGCCGAGCTTCATGACTATGTCCAAGAAGATTTAGTCAAATTATATCCATCTGTCAAAGATATAGTGAAGATAACAGTGATTCAATCAGGAGATCACATCTTGAACACGTTTGATGAAAGAATTTGTTCATTTGCCGAACAGAAGTTTGGAAGAGATGGTATAGAAGTTCAAACAGGATGTCGAGTTGTGAATGTTAATGACAAGGAAATCGCAGTAAAAGTGAAATCAACAGGAGAATTGTGTTCTGTACCCCATGGATTGATTGTCTGGTCAACAGGAATTGCAACTCGTCCAGTTGTGAGAGATTTTATGGAACAAATTGGTCAGGGTAAAAGGAATGTCCTAGCAACTGATGAATGGTTACGAGTGAAGGGATGTGAATCTGTGTATGCCATTGGTGATTGTTCTTCAATAAATCAACGTAAAATCATGGATGATTGCTTGGCCATTTTTGAAGCTGCAGACAAGGACAAATCAGGTACCTTAACTGTTGAAGAATTCAAGGATGTGCTAGATGACATTATCTTAAGATATCCGCAATTGGAACTCTATAGAAAGAGCCAACATCTGTTAGATTTCTCTGCTCTGTGGAAAGATTCCGAAGGAAATGATAGGGAAGAAATAGACATAGAAGGGTTTAAGATGGCCATTTGTCATGTGGATTCACAGATGAAGAGTCTGCCGGCAACTGCACAGGTTGCTGCACAACAGGGTGCATATCTAGCTGGATGCTTTAACAGAAGGGATCAGTGTGCAGAGAATCCTGAAGGTCCTCTAAGATTTGGAAGATCTGGACGCCATAAGTTTCGTCCCTTCAGGTATAAGCATTTTGGGCAATTTGCTCCCCTTGGTGGAGAGCAAGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAGTGGCTTTGGTATTCTATATATGCAAGCAAACAAGTGAGCTGGCGCACAAGGGTGTTAGTCATTTCAGATTGGACAAGAAGATTCATATTTGGGAGAGATTCTAGTCGTATTTAA 1734 0.4141 MKIASFFSKAFHGLPSCYKLVLLCTLSGGGVVLYSESRSDAKPPAPSIGTNERKKKKLLVLGTGWAGTSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECLKIDSANKKVICMSNIDNNLVGNGEFSLDYDYLVIAIGAQVNTFNTPGVMENCYFLKEVEDAQKIRQSVIDCFEKAVLPSLSEEERRTNLHFIVVGGGPTGVEFAAELHDYVQEDLVKLYPSVKDIVKITVIQSGDHILNTFDERICSFAEQKFGRDGIEVQTGCRVVNVNDKEIAVKVKSTGELCSVPHGLIVWSTGIATRPVVRDFMEQIGQGKRNVLATDEWLRVKGCESVYAIGDCSSINQRKIMDDCLAIFEAADKDKSGTLTVEEFKDVLDDIILRYPQLELYRKSQHLLDFSALWKDSEGNDREEIDIEGFKMAICHVDSQMKSLPATAQVAAQQGAYLAGCFNRRDQCAENPEGPLRFGRSGRHKFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSIYASKQVSWRTRVLVISDWTRRFIFGRDSSRI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03574 577 PANTHER NADH DEHYDROGENASE 50 577 IPR045024 GO:0003954|GO:0006116
Pumo4g03574 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 424 576 - -
Pumo4g03574 577 Gene3D - 46 394 - -
Pumo4g03574 577 Gene3D - 434 576 - -
Pumo4g03574 577 SMART efh_1 382 410 IPR002048 GO:0005509
Pumo4g03574 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 47 407 - -
Pumo4g03574 577 SUPERFAMILY EF-hand 333 463 IPR011992 -
Pumo4g03574 577 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Pumo4g03574 577 SUPERFAMILY FAD/NAD(P)-binding domain 55 274 IPR036188 -
Pumo4g03574 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Pumo4g03574 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Pumo4g03574 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 58 77 - -
Pumo4g03574 577 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Pumo4g03574 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 378 IPR023753 GO:0016491
Pumo4g03574 577 SUPERFAMILY FAD/NAD(P)-binding domain 220 375 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03574 Pumo-Chr4 74404509 74409319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03574 7 577 Chloroplast and Mitochondria Gene Families AT4G21490 64.236 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03574 K03885 - zju:107416753 950.658