Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03568 ATGGAATCTCAGGTGAAGCACGCCCTCGTTGTCAAAGTTATGGGTCGTACTGGGTCTCGAGGGCAGGTGACTCAGGTTAGAGTGAAGTTTTTGGATGATCAAAACCGACACATCATGAGGAATGTGAAAGGACCAGTAAGAGAAGGAGACATTCTCACCCTACTTGAGTCTGAAAGAGAAGCAAGAAGATATCTTTTCATCATTGACCTAGATGTTACACTGGATAAATGCAAGCTGATTGGAGAACCTATCCCATTTTTCAATAATGCACCTCCTTCACAGCCAAAAGTCAATCCTCCTGCTAGTTCTGACTGGTGGTCTTCCTTTGTGTTCTATGATGTCATTGATGTGTACCCACTTTTGTGGATCTAA 372 0.4328 MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRYLFIIDLDVTLDKCKLIGEPIPFFNNAPPSQPKVNPPASSDWWSSFVFYDVIDVYPLLWI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03568 123 Pfam Ribosomal protein S28e 4 63 IPR000289 GO:0003735|GO:0005840|GO:0006412
Pumo4g03568 123 FunFam 40S ribosomal protein S28 1 65 - -
Pumo4g03568 123 CDD S1_S28E 6 63 IPR000289 GO:0003735|GO:0005840|GO:0006412
Pumo4g03568 123 Hamap 30S ribosomal protein S28e [rps28e]. 1 65 IPR000289 GO:0003735|GO:0005840|GO:0006412
Pumo4g03568 123 Gene3D - 1 64 IPR012340 -
Pumo4g03568 123 SUPERFAMILY Nucleic acid-binding proteins 2 64 IPR012340 -
Pumo4g03568 123 PANTHER 40S RIBOSOMAL PROTEIN S28 1 63 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03568 Pumo-Chr4 74322000 74326825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03568 1 63 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 87.302 1.03e-33 110