Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03566 ATGCACAGGGAAAGGAGTGAGCTGAAGATTAACGCTGAGCTTGGAAAAATGGGTGAGGAGAGATCTGGTTCACAGTACAAGAGAGTGAAGATCCATGGAGAAGTTCTATTGGGATTTATAATTATGTTGATCTGCACAGTCCAGTTTTCACTTGCAGACACTGATCCCACTGATGTCAATGCAATTAATGGCTTATATAATGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTTCTAATGGGGGAGACCCGTGCGGACAAGGGTGGCAAGGTGTTCAATGTAATGGTTCAGTCATACAAGAAATAATTATGAATGGTGCGAACTTGGGAGGAGAACTGGGTGATAGCTTGGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGGGGAAGTATTCCATCCAGTTTACCAGTCACTTTACAACACTTCTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCAGCCTCTTTATCCACATTGACTGAACTGAATGACATGTCTCTTAACGACAATCTTTTAACAGGAGAAATACCAGATGCATTTCAGTCTCTTACACAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTATGGAGAATTTGTCAGCTCTGACCAGCGTACATTTACAGAACAATAACCTGTCTGGGACCCTGGATGTTTTACAAGACCTTCCACTGCAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGACCAATACCTCCAAAGTTGTTGAGCATCCCTAGCTTCAGAAAAGATGGAAACCCGTTTAATGTTAATGACAATGCTACTATAGCCCCAGCACATCCACCTCGGTCTCCAGTGACAGCATCACCATCAGGAACTGTGGTTTCTGTGACACCATCTTCTGGACGTACACCTGCTAAACCGACTCAGGGACCAACTGCAGCAAAGGAATCAAATTCCGGGAAATCGAAGAAAAACACCAAAAGGGTGGTTTGGATATCTATTTCTGGTATATTGGTGTTTATTATTGTAGTACTTGGACTTCTTCTCTTTGTTCCAAGATGTAGCAGAAGAGAACGGGTTAACAGAAGTTCCAAGCAACATCAAGTTGGTGCATATGGAGGTGAAAGACAGAATCCTAGGGAATATGGGGCTTTTGTCCAACCACCTAGTCGAACTGAGAAAGTACCAAAAGGTGCTGTTGTGAGGCCGAAAGGGGATCATCAAGAAGAGGCACGGAGAGTGAGGGCTATTCCAAAGCTGCAAGGCGAGCAAGAGAAGGATGAACAAAGAATGGGAGCAATCCCAAAGCTGTTAGAACATGAGATAGATATGAGTTCACTAGATTTATATTCAATGCCTTCTCCACCGCCACCTCCACCACTTCCTATTGAGAGGGTGATTGTTGAACCAACCTCATTCCACAAAGGGGCTAACATCAATCCTCCCAAAAAAAGTCCTGTTCCTCCCACTTCTGCGAAAACTTTCACCATTGCATCCCTTCAACAGTATACAAGTAGCTTTTCTCAAGACAATCTTATAGGTTTAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGACAGTTTCTGATCACCAAACAGATGATGAGTTTCTTGAATTGATAAACAGCATTGCCAGAATCCAGCATGCAAATATTGTTAAGCATATTGGGTACTGTGCAGAGCATGGTCAAAGGCTTCTAATTTATGAGTACTGCAGTAATGGATCGCTTAAGGATGCTCTCCATTCAGATGATGAAATCAAAACAAGACTGTCATGGAATGCTCGCATTCGGATAGCTCTAGGGGCAGCTAGAGCCTTAGAGTACTTGCATGAGAAGTGTCAGCCACCTGTTGTCCACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGATGTTTTTGTGCGTGTATCTGATTGTGGTTTGTCTCCACTAATAACTAAAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCATATGGTTATGAGGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAAAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGGATGCGCCATCGAGGGGAGCAGTTTTTGGTGAGGTGGGCTATTCCTCAGCTTCATGACATTGATGCCTTATCAAAGATGGTTGATCCTTCTCTAAAAGGAAATTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCAGAGCCAGAATTTAGGCCAGCAATGTCAGAGGTTGTCTCGTACTTAATAAATATGATAAGTAAGGAATCTCAGCAAAGTGAATCAAATGGATAA 2403 0.4232 MHRERSELKINAELGKMGEERSGSQYKRVKIHGEVLLGFIIMLICTVQFSLADTDPTDVNAINGLYNALGNPVLPGWVSNGGDPCGQGWQGVQCNGSVIQEIIMNGANLGGELGDSLGSFVSIRAIVLNNNHIGGSIPSSLPVTLQHFFLSDNQFTGSIPASLSTLTELNDMSLNDNLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQNNNLSGTLDVLQDLPLQDLNVENNQFAGPIPPKLLSIPSFRKDGNPFNVNDNATIAPAHPPRSPVTASPSGTVVSVTPSSGRTPAKPTQGPTAAKESNSGKSKKNTKRVVWISISGILVFIIVVLGLLLFVPRCSRRERVNRSSKQHQVGAYGGERQNPREYGAFVQPPSRTEKVPKGAVVRPKGDHQEEARRVRAIPKLQGEQEKDEQRMGAIPKLLEHEIDMSSLDLYSMPSPPPPPPLPIERVIVEPTSFHKGANINPPKKSPVPPTSAKTFTIASLQQYTSSFSQDNLIGLGMLGSVYRAELPDGKILAVKKLDKTVSDHQTDDEFLELINSIARIQHANIVKHIGYCAEHGQRLLIYEYCSNGSLKDALHSDDEIKTRLSWNARIRIALGAARALEYLHEKCQPPVVHRNFKSANILLDDDDVFVRVSDCGLSPLITKGSVSQLSGQLLTAYGYEAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRMRHRGEQFLVRWAIPQLHDIDALSKMVDPSLKGNYPAKSLSNFADIISRCVQSEPEFRPAMSEVVSYLINMISKESQQSESNG 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03566 800 ProSiteProfiles Protein kinase domain profile. 510 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03566 800 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 55 281 - -
Pumo4g03566 800 MobiDBLite consensus disorder prediction 288 328 - -
Pumo4g03566 800 MobiDBLite consensus disorder prediction 388 414 - -
Pumo4g03566 800 MobiDBLite consensus disorder prediction 400 414 - -
Pumo4g03566 800 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 477 587 - -
Pumo4g03566 800 SUPERFAMILY Protein kinase-like (PK-like) 485 785 IPR011009 -
Pumo4g03566 800 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 94 785 - -
Pumo4g03566 800 MobiDBLite consensus disorder prediction 269 328 - -
Pumo4g03566 800 Gene3D Transferase(Phosphotransferase) domain 1 588 799 - -
Pumo4g03566 800 Gene3D Ribonuclease Inhibitor 56 277 IPR032675 -
Pumo4g03566 800 Pfam Leucine rich repeat N-terminal domain 56 95 IPR013210 -
Pumo4g03566 800 Pfam Protein tyrosine and serine/threonine kinase 513 785 IPR001245 GO:0004672|GO:0006468
Pumo4g03566 800 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Pumo4g03566 800 SUPERFAMILY L domain-like 55 262 - -
Pumo4g03566 800 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 588 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03566 Pumo-Chr4 74299969 74307131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03566 49 796 Strubbelig Receptor Gene Family AT4G03390 60.550 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo4g03566 PK_Tyr_Ser-Thr 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03566 - - gmx:100811490 1313.52