Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03558 ATGGGCTGTTGTGTGTCAACAAGCAGTCAGAGTACTTGTAGTAGCGGGAGCAATGGGGACACGATCGCTCCAACGTGTCTAGAGATCGGATTCTTTGGTCAAAAGAGTGCAAGGAGAACATTCTCTGATCATGTTGTCTCTCTGCACCAATTACCATCCTTGCCCAACAGAATTTTCACTAATGGAAAGAGCAGGTCTTCTTGCATATTTACGCAACAGGGTCGGAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCAGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCACCTTGTCGCACGCAAAGTCAGGGAAGCTTTGCCACTGAAACTGCTTTCATTTTTGCATTCCTCTGAATCAGGGCGAAATGGTTCAGGTAAAGCTTGTTTCAGAGGCAACATAAAGCCTGAAAGTGGAGAGTCTGAGAAAGATTTATCTGCTGAAGATAAAGAAAATTCTATGTGGAGAGAAGTTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAGGTCTCATGCAAATTTGGACTGCTTCTGTAGTGGAAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAATTGACCGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAACGGTGCAAGGGCAGGGTATTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATATGGTGTGATTTCTATACCTGAATTTTCTCATCGACTGCTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTCTGGGATGTTTTGAGCAATGAAGAGGTGGTTGGGATAGTATCTTCAGCGCCAACTCGATCGTCAGCAGCAAGGATTCTGGTGGATTCCGCAGCCCGGGAGTGGAAACTCAAGTATCCAACGTCGAAAATGGATGACTGTGCTGTTGTGTGCCTATTTTTGGATGGAAAAATGGATTCAGAATCTGACTGTGATGAGCAATGCTTCTCTGCTGCAACCATCCAGAGCAACCATTCGGGTAATCCGGTTGAGTCAGATGATGGTCAAAAGCCTGAGCCATCTTTGCAAAGGAACTTCACTGTTAGATCCTCAGAAGAAAATGAGACCTTTGGAAGTGGAGGAGGAGGGGTAACTGTTGATGTTGAAGATGGAACTTCAACGGCTGAAGATCAAAACTGGTCAGGTCTGGAGGGTGTCACAAGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTATTGA 1425 0.4463 MGCCVSTSSQSTCSSGSNGDTIAPTCLEIGFFGQKSARRTFSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGRNGSGKACFRGNIKPESGESEKDLSAEDKENSMWREVFMKAYKAMDKELRSHANLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVGIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCFSAATIQSNHSGNPVESDDGQKPEPSLQRNFTVRSSEENETFGSGGGGVTVDVEDGTSTAEDQNWSGLEGVTRVNSLVQLPRFSEERPNY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03558 474 CDD PP2Cc 65 370 IPR001932 -
Pumo4g03558 474 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
Pumo4g03558 474 Pfam Protein phosphatase 2C 92 347 IPR001932 -
Pumo4g03558 474 MobiDBLite consensus disorder prediction 137 160 - -
Pumo4g03558 474 SMART PP2C_4 55 368 IPR001932 -
Pumo4g03558 474 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Pumo4g03558 474 Gene3D - 59 378 IPR036457 -
Pumo4g03558 474 MobiDBLite consensus disorder prediction 408 427 - -
Pumo4g03558 474 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Pumo4g03558 474 MobiDBLite consensus disorder prediction 391 451 - -
Pumo4g03558 474 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03558 Pumo-Chr4 74205667 74208782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03558 1 472 PP2C-type Phosphatase Gene Family AT1G03590 69.538 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03558 - - gmx:100777448 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03558 4 74205667 74208782 Pumo4g03558 4 74205667 74208782 ECH
Pumo4g03558 4 74205667 74208782 Pumo11g01110 11 39565307 39569818 PCT