Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03539 ATGACACTTCTCTCTCTGCGTCAACCTCACCCTCCAGCTTCAGCTCCAGCTCCGCTCATGGCGTCTTTACCTTCGGCTCGCAGCAACGGTGCTTCCAAGGGCTTTGATTTTGGTTCCGGCGACATACTCAGTTCGTACGAGGAGGACAATACCAACTACGATTCTTCTAACGGCACTCACATCGATCCCTCCAAGGGTTCTCATGCATCAGGGATGGCAAGAACATCAATAGTTCCTGCTACTTCCTATAGTTTGTTTGAAGATTCTTTTAGCCAGGATGTGATTGCAACCGTTGAGAAGAGTATGAAAACACACGCTGACAACATTATGCGGTTTCTTGAGGGGCTTGGTTCAAGGCTGTCACAGTTGGAATTATATTGTTACAATCTTGACAAATCAGTTGGAGCAATGCGATCTGATTTAAATAGTGACCATGAGGAGGCGGATTCAAAACTCAAATCTCTTGATAAACACCTTCAAGAAGTACACAGGTCTGTGCTAATTTTGAGAGACAAGCAAGAGCTAGCTGAGACTCGGAAAGAATTAGCCAAGCTTAAACATGTTCGGAAAGAATCATCTTCCTCAAGCCATTCACAGTCAAATGAGGAGAGATCTTCACCTTCTTCCATGGATCCAAAAAGAATTGATAATGCATCTGACACACATAACCAAGAGCTAGCTCTTGCCTTACCTCATCAAGTTGCCCCATGGCAACAGCCTGTGGCAGTGGCATCCTCCTATCAAGCGCCAGCTCCAACTGTGAGCCAAGCCACTCATCGACCACATTATTACTTGATGCCCACCCCTTTGCCCAATCCACAAGCTGTGGCCCAGCTTCCTCAGAATCAGTATTTGCCTTCTGATCCACAGTATCGAATTCCACAATCGACATCATCATCTCAGGTAACCCAATCCCCACCCGTGCAACAATTTTCGCAGTATCAGCAGCTACAACACCAACAACAGCAATGGCCTCCACAGTTACCACCACAGCAGGTGCAAGTGCCACCTCCGCAACCACCCTCAACACAGTCTCAAGCGAGACCCCCCTTGACAAATGCTTACACTCCATATTCTACCAGCCAAGCTACAAATCCTCTTCCCACAGAAACACTACCAAACAGCATGCCAATGCAAATGCCTTATTCAGGAATTCCACCCCAAGGATCTAGCCGTGGTGGCAATGCCATGCCATATGGATATAGCGGAGCTGGTAGAACAGTTCCACAGCAACCTCTGCCCCAGCATGTGTATGGAACTAGCGGGACCCACACCACGCATGCTCCAGCTAGTTCCTACATGGTGTATGATGGTGAGAGTGCCAGAGCACATTATCCACCCCAACCTTCTCATTATGCTCAAGCTGGATATCCTCCAACTAGTGCTTCCCTTCAGAACCCTGCACCACATAATCTTATGGTCCGGAGTCCTAGACAGTCGCAATTTATTCGTAGCCATCCCTACAACGAATTGATCGAGAAATTTGTGAGCATGGGATATAGAGGCGATCATGTAGCAAGCATTATTCAGAGGATGGAGGAAACCCAGCAGCCTATAGATTTTAACTCTGTACTTGACCGGTTGAATGTGCATAATACCCAGAGGGGATGGTCAGGGTAA 1620 0.4747 MTLLSLRQPHPPASAPAPLMASLPSARSNGASKGFDFGSGDILSSYEEDNTNYDSSNGTHIDPSKGSHASGMARTSIVPATSYSLFEDSFSQDVIATVEKSMKTHADNIMRFLEGLGSRLSQLELYCYNLDKSVGAMRSDLNSDHEEADSKLKSLDKHLQEVHRSVLILRDKQELAETRKELAKLKHVRKESSSSSHSQSNEERSSPSSMDPKRIDNASDTHNQELALALPHQVAPWQQPVAVASSYQAPAPTVSQATHRPHYYLMPTPLPNPQAVAQLPQNQYLPSDPQYRIPQSTSSSQVTQSPPVQQFSQYQQLQHQQQQWPPQLPPQQVQVPPPQPPSTQSQARPPLTNAYTPYSTSQATNPLPTETLPNSMPMQMPYSGIPPQGSSRGGNAMPYGYSGAGRTVPQQPLPQHVYGTSGTHTTHAPASSYMVYDGESARAHYPPQPSHYAQAGYPPTSASLQNPAPHNLMVRSPRQSQFIRSHPYNELIEKFVSMGYRGDHVASIIQRMEETQQPIDFNSVLDRLNVHNTQRGWSG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03539 539 MobiDBLite consensus disorder prediction 1 21 - -
Pumo4g03539 539 Pfam UBA-like domain (DUF1421) 488 532 IPR010820 -
Pumo4g03539 539 MobiDBLite consensus disorder prediction 346 373 - -
Pumo4g03539 539 Coils Coil 168 188 - -
Pumo4g03539 539 MobiDBLite consensus disorder prediction 48 70 - -
Pumo4g03539 539 MobiDBLite consensus disorder prediction 284 373 - -
Pumo4g03539 539 MobiDBLite consensus disorder prediction 329 345 - -
Pumo4g03539 539 MobiDBLite consensus disorder prediction 184 217 - -
Pumo4g03539 539 MobiDBLite consensus disorder prediction 284 328 - -
Pumo4g03539 539 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 25 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03539 Pumo-Chr4 73966299 73969909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03539 94 207 Trihelix Transcription Factor Family AT5G14540 31.579 1.28e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03539 - - gmx:100527106 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03539 4 73966299 73969909 Pumo4g03539 4 73966299 73969909 ECH