Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03521 ATGGCATTACTACACTGCAGGAAAGATGAAAAGCAATCTAGAAAGAGATACAAGTGTAATAGTGAGTACGAGAAGGAAGAGCAGGTTGCCTGGTTTGATTTGTCTACAATAGTTCTGCGACAAATAACTTTTCGCCTGACAACAAACAGGGGAAGGAGGTTTTGGATCAGTATAAGAAGCTTTGGAGGAAATGAAACTGAAGCAAACACAAAGCATGTAGTTGGAACCTATGGCTATCTGCCGCCAGAGTATATAATTGGTGGAGTTTATTCAACAAAGTCGGATGTTTTCAGCTTTGGTGTGTTAATATTGGAGATAGTGAGTGGGAAGAGAAATAGAGGATTCTGTCATCAAGATAATCTTCTGGCACATGCATGGAGACTATTTACTGAAGGCAAATGCCCTGAAATGGTTGATGCAACAATAAGAGACTCACTCAATTTATCTGCAGCGATTAGATTAATTCATGTGGGACTACTGTGTGTGCAACTAAGTCCAGACGACAGGCCAAGCATGTCCTCTGTGGTCCTGATGCTGAGCAGTGAATCTGCATTGCCTCAGCCAAAATTGCCTGGATTCTTTACAAATTGGAATCTGGTTGGGGACTGTTCTTCATCAAGCAATTATAAACAATACTCAAATAATGACATGACAGTTAGCATAATGTCTGCTCGATAG 678 0.4071 MALLHCRKDEKQSRKRYKCNSEYEKEEQVAWFDLSTIVLRQITFRLTTNRGRRFWISIRSFGGNETEANTKHVVGTYGYLPPEYIIGGVYSTKSDVFSFGVLILEIVSGKRNRGFCHQDNLLAHAWRLFTEGKCPEMVDATIRDSLNLSAAIRLIHVGLLCVQLSPDDRPSMSSVVLMLSSESALPQPKLPGFFTNWNLVGDCSSSSNYKQYSNNDMTVSIMSAR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03521 225 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03521 225 Pfam Protein tyrosine and serine/threonine kinase 70 177 IPR001245 GO:0004672|GO:0006468
Pumo4g03521 225 Gene3D Transferase(Phosphotransferase) domain 1 28 187 - -
Pumo4g03521 225 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 59 225 - -
Pumo4g03521 225 Pfam Domain of unknown function (DUF3403) 180 225 IPR021820 GO:0004674
Pumo4g03521 225 SUPERFAMILY Protein kinase-like (PK-like) 68 195 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03521 Pumo-Chr4 73575970 73578242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03521 59 194 Receptor kinase-like Gene Family AT4G23290 55.319 3.08e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03521 PK_Tyr_Ser-Thr 3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03521 - - gmx:100795006 281.567