Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03519 ATGCCATCATCACTGGCTCCATTGTGCTTCGTCATGTGCATGATACTAGGATTGGCCATATGGTTATGGAAAAGGAAAGTCGAAATGGAAAGGATGAAAAACATATTTGACCAAAGTCATCACAGCTATAGGCAAAGGCAGGAGGAGCCGGATTTACCAGCATTTGACTTGCCTGTCATTGCTAAGGCCACTGATAACTTCTCAGACACTAACAAACTGGGAGAAGGTGGTTTTGGACCAGTGTACAAGGGCACTCTCATAGCTGGACAAGACATAGCTGTGAAACGGCTTTCAAACAACTCTGGTCAGGGTATTGAAGAATTTAAAAATGAAGTTGCATTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCATGGTTATTGCATTCAAGAGGAAGAAAAAATGTTGATATATGAATACATGCCCAACAAGAGCTTGGACTACTTTATTTTTGATGAAATTAGGAGCAAATTATTGGATTGGAGTAAGCGTTTCCATATTATTGGTGGCATTGCTCGAGGGCTAGTTTATCTTCATCAAGACTCTAGATTGAGGATTATTCATAGAGATTTGAAGACCAGCAATATTCTACTAGATGAAAATATGAATCCCAAAATATCGGACTTTGGCCTTGCTCGTACATTATGGGGAGATCAAGTAGATGCGAACACTAACAAGGTTGCCGGGACATATGGATACATGCCTCCTGAATATGCTGTACATGGACATTTCTCAATGAAATCCGATGTTTTTAGTTTTGGTGTAATCATTTTAGAAATAGTAAGTGGGAAGAGAAACAGAGATTTTTCTGATCCAGAACACTTTCTTAATCTTCTTGGGCATGCATGGAGACTATGGACTGAAGGAAGGCCTAACAAACCTTATAGATGCATTTTTAGGTGA 909 0.3938 MPSSLAPLCFVMCMILGLAIWLWKRKVEMERMKNIFDQSHHSYRQRQEEPDLPAFDLPVIAKATDNFSDTNKLGEGGFGPVYKGTLIAGQDIAVKRLSNNSGQGIEEFKNEVALIAKLQHRNLVKLHGYCIQEEEKMLIYEYMPNKSLDYFIFDEIRSKLLDWSKRFHIIGGIARGLVYLHQDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTLWGDQVDANTNKVAGTYGYMPPEYAVHGHFSMKSDVFSFGVIILEIVSGKRNRDFSDPEHFLNLLGHAWRLWTEGRPNKPYRCIFR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03519 302 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 143 296 - -
Pumo4g03519 302 SUPERFAMILY Protein kinase-like (PK-like) 45 290 IPR011009 -
Pumo4g03519 302 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 31 142 - -
Pumo4g03519 302 Gene3D Transferase(Phosphotransferase) domain 1 143 300 - -
Pumo4g03519 302 Gene3D Phosphorylase Kinase; domain 1 40 142 - -
Pumo4g03519 302 SMART serkin_6 67 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03519 302 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 294 - -
Pumo4g03519 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pumo4g03519 302 Pfam Protein tyrosine and serine/threonine kinase 70 281 IPR001245 GO:0004672|GO:0006468
Pumo4g03519 302 ProSiteProfiles Protein kinase domain profile. 67 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03519 Pumo-Chr4 73563270 73564803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03519 55 293 Receptor kinase-like Gene Family AT4G11530 62.917 5.10e-110 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03519 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03519 - - gsj:114373347 543.117