Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03515 ATGCAAAACATGAGAACACAATGGTTTTGGGTTTTTCTGTTCTCTTGTATATCAAGAACCTCCACTTCACTAGACAGTATAGCTCCAACTCAACCCATCAGTGATGGACAGACATTGATATCAAATGAAAAAACCTTTGAACTTGGATTCTTCAGCCCTGGAAAGTCACAGAGCCGATACTTGGGTATTTGGTACTACAACATAACTCCTTTAACAGTGGTTTGGGTTGCCAACAGAGAAGCACCACTCAACACTACCTCAGGAGTTGTAAAACTCAGTGATCAAGGTCTTGTTGTCCTTGTCAATGGCACAAACAACACACTGTGGTCCTCCAACATGTCAGCCACAGCAGAGAATCCAATTGCTCAACTATTAGACTCAGGAAACCTTGTTGTGAAAGATCAAAATAGTGAGCATGAGCACTATCTTTGGCAGAGTTTTGATCATCCATGTGATACATTATTGTCGGGAATGAAGCTAGGTTGGAATCTAGAAAAGGGAGAAGAATGGTTTCTGTCATCCTGGAAAAGTGCCAATGATCCTGGTCATGGAGAATACTCTTTCAAAATAGACCCTAGAGGATTTCCACAAGTAGTTCTATTGAAGGGAAGCAACATAAGCACTAGATTTGGGCCATGGAATGGCCTTTACTTTTCAGGGTCTTTGATTGATTCAAGTAGTGCAGATGTTAAATTTGATTATGTTTTGAACAAAAAAGATATATTTTATCAGTTCCAGGTCCTAAATAAATCTCTTATCTACAGGGTTAGGATGACCCCTTGGCAAATTGCTCAGGTTTTCCTTTGGGAAAGTCAAACCAGCGAATGGAACACTCAATATACTCAACCATCATTCCCATGTGATCATTATAGGACGTGTGGTGCAAATACCATTTGCAATGCCCTTAACAATCATATGTGTACATGCTTGGATGGATTCTCTGTACCCATGAATGGGTCCAAGGATTGTGTTCGAACCATGCCTTTGACTTGTAACAAGGACAAGTTCAGGAAGTACACTGGCATGGTTCTTCCTGACACATCCTCATCTTGGTATAATAAGAGCATGGATCTACAGCAATGTGAGGATTTGTGTCTGCAAAACTGTTCCTGTACGGCATATGCAAATTTGGATATACGTGGAGGAGGAAGTGGTTGCTTGATTTGGTACCATGATCTCATTGACTTGAGGCATTATCCACAAGCTCAAGGGGGCCAAGACATTTATATTCGACACCCTGTTTCAGAGCTAGATCACAATCAGAAAAATGGATTGAGCAAGAGGAAAATTGAAGCCGTTGTCGCTGGCTCTACCGTGTTCATCATGTGCATGATACTTGGATTGGTCATATGGTTATGGAAAAAGAAAGTCCAAATGAAAGATAATGACTTTCAGGGTACTCTAATAGATGGGCAAGACATAGCGGTGAAACGACTTTCAAACAACTCTGGTCAGGGTTTGACAGAATTTAAAAATGAAGTTGCATTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCATGGTTATTGCATTCAAGAGGAAGAGAAAATGTTGATATATGAATACATGCCCAACAAGAGTTTGGACTACTTTATTTTTGATGAAATTATGAGCACACTATTGGATTGGAGTATGCGTTTCCATATTATTGGTGGCATTGCTCGAGGGCTAGTGTATCTTCATCAAGACTCTAGATTGAGGATTATTCATAGAGATTTGAAAACCAGCAATATTCTACTAGATGAAAATATGAGTCCCAAAATATCAGACTTTGGCCTTGCACGCACATTATGGGGAGATCAAGTAGATGCTAACACTAACAAGATTGTTGGGACATATGGATACATGCCTCCTGAATATGCTGTACATGGACATTTCTCAATGAAATCCGATGTCTTTAGTTTTGGTGTCATCATTTTAGAAATAGTAAGTGGGAAGAAAATAAGAGATTTTTCTGATCCAGAACACTTTCTTAATCTTCTTGGACATGCATGGAGACTATGGACTGAAGGAAGGCCAACAAACCTAATGGATGCATTTTTAAGTGAAAGATGCACTTCATCTGAAGTTATTCGATGTATACATGTAGGCTTGTTATGTGTGCAACAAAGACCAGAAGATAGGCCTGATATGTCAGGTGTGGTTCTGATGCTGAATGGTGAAAAATTGCTACCACAGCCAAAGGCACCTGGTTTTTACAATGGAAGGGACAAAGCAGATTTGTTTGGAAAGTTAAAACCATTTTCTAACAATGATGTTTCCCTTACAGTTTTAGAGGCAAGATAA 2292 0.3949 MQNMRTQWFWVFLFSCISRTSTSLDSIAPTQPISDGQTLISNEKTFELGFFSPGKSQSRYLGIWYYNITPLTVVWVANREAPLNTTSGVVKLSDQGLVVLVNGTNNTLWSSNMSATAENPIAQLLDSGNLVVKDQNSEHEHYLWQSFDHPCDTLLSGMKLGWNLEKGEEWFLSSWKSANDPGHGEYSFKIDPRGFPQVVLLKGSNISTRFGPWNGLYFSGSLIDSSSADVKFDYVLNKKDIFYQFQVLNKSLIYRVRMTPWQIAQVFLWESQTSEWNTQYTQPSFPCDHYRTCGANTICNALNNHMCTCLDGFSVPMNGSKDCVRTMPLTCNKDKFRKYTGMVLPDTSSSWYNKSMDLQQCEDLCLQNCSCTAYANLDIRGGGSGCLIWYHDLIDLRHYPQAQGGQDIYIRHPVSELDHNQKNGLSKRKIEAVVAGSTVFIMCMILGLVIWLWKKKVQMKDNDFQGTLIDGQDIAVKRLSNNSGQGLTEFKNEVALIAKLQHRNLVKLHGYCIQEEEKMLIYEYMPNKSLDYFIFDEIMSTLLDWSMRFHIIGGIARGLVYLHQDSRLRIIHRDLKTSNILLDENMSPKISDFGLARTLWGDQVDANTNKIVGTYGYMPPEYAVHGHFSMKSDVFSFGVIILEIVSGKKIRDFSDPEHFLNLLGHAWRLWTEGRPTNLMDAFLSERCTSSEVIRCIHVGLLCVQQRPEDRPDMSGVVLMLNGEKLLPQPKAPGFYNGRDKADLFGKLKPFSNNDVSLTVLEAR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03515 763 SMART ntp_6 331 412 IPR003609 -
Pumo4g03515 763 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pumo4g03515 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Pumo4g03515 763 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Pumo4g03515 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 525 728 - -
Pumo4g03515 763 PIRSF SRK 462 763 IPR024171 GO:0004674
Pumo4g03515 763 PIRSF SRK 1 465 IPR024171 GO:0004674
Pumo4g03515 763 SUPERFAMILY Protein kinase-like (PK-like) 465 720 IPR011009 -
Pumo4g03515 763 Gene3D Hepatocyte Growth Factor 327 412 - -
Pumo4g03515 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 330 412 - -
Pumo4g03515 763 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pumo4g03515 763 SMART serkin_6 440 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g03515 763 Pfam D-mannose binding lectin 72 176 IPR001480 -
Pumo4g03515 763 CDD PAN_AP_plant 328 411 - -
Pumo4g03515 763 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 707 - -
Pumo4g03515 763 ProSiteProfiles PAN/Apple domain profile. 331 413 IPR003609 -
Pumo4g03515 763 Gene3D Phosphorylase Kinase; domain 1 453 524 - -
Pumo4g03515 763 FunFam Cysteine-rich receptor-like protein kinase 11 453 524 - -
Pumo4g03515 763 Gene3D - 19 147 IPR036426 -
Pumo4g03515 763 SMART blect_4 30 150 IPR001480 -
Pumo4g03515 763 Pfam Protein tyrosine and serine/threonine kinase 472 669 IPR001245 GO:0004672|GO:0006468
Pumo4g03515 763 Pfam S-locus glycoprotein domain 209 314 IPR000858 GO:0048544
Pumo4g03515 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 147 - -
Pumo4g03515 763 CDD B_lectin 30 150 IPR001480 -
Pumo4g03515 763 Pfam PAN-like domain 331 396 IPR003609 -
Pumo4g03515 763 Gene3D Transferase(Phosphotransferase) domain 1 525 727 - -
Pumo4g03515 763 ProSiteProfiles Protein kinase domain profile. 427 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03515 Pumo-Chr4 73526461 73529889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03515 464 734 Receptor kinase-like Gene Family AT4G23230 58.456 2.96e-111 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo4g03515 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03515 - - gsj:114373347 1303.12