Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03509 ATGGATTCCGAATCCGAGTTTTCCATGCCTAATTACAGGGAACGTGAAGCTATAAGCTATTACCTCCGAATCGAGCACGAATTCATGGCTCCCAAGGACTTTTACAAAGAAGCAAGACACCTTCAGCATCGGAAGCACGCGGTTGCAACAATCGCTAGGCTCTCTCAAGGCGAAGTTCATGATGCGTATGTTGCCTATCTTGCAATGAACTACTTCGATCGCTTTGCTTCAACGGATCCATTTACAGATGTGCGAGGTTCTTCTGTAACTGATACAGTTTGTTTCGTTGCAACCTGTTGCTACACGCTTTCCGCTAAGATGAGGACAAATCAATTCAAACTCCATCAGTTTCAGGCGGAGAAAGAATTGAGTTTCAAGCCTAATAGGTTAATGAAAATGGAATTTCGCATTCTCAGTGGACTTGACTGGCGAATGCTATCAGTAACTCCATTTTACTTCCTGGACCACTATTATCCCACCTTCAAAAAAATCGGTGGTTTCAAACGCCGATCCATCAATGAGATCATAGTCCAGTCACAAGGAGAGTACCACTTCACTCAATTCAAACCTTCTGATATTGCAATGTCCGCTTTTCTTGCTGCTACTTACATTGGATATCCCTCAAAGTTTAATGCAATTGAAAAATCAATTGACCAATTGGGGGAGCTGGTGGGCTGTTGGAGCCAGCTGGTTCATCTTTGTCATAAGAGGGACATCGAGATATGTAGTGCGTCAGGAACTGTAATCTCTGCAACTAAAATTGTGGCGGCGAAGCCCCCAACCCAATCTGAAGAACCTGCAGCAGAGATAGAGACAACAAAATCTGAAGAAGAGTTAGCAGAATTGGTTGAGTTACAAATAAACGAATATGGCACGACCAAGGCCACCCAGTTTTGGAACACGGTGTTGGATACTGAAGAGGAAGAAGAAAATGTAGCACCATTAACCCGCCGACCAAGACGTGATAGGGGCAAGGAAGTGGTGGAGGCATCTAAAGAAGTTGCAGAAGCTGAGACTGACGCAACAAAGCAACAAGGACAGGACCAGGAAAAGGCCGTGACAGTGGCAGATACATCTGACCAAAAAAAAGATGTAGAAGCCGAGACTAAGGTAAACCCAAAAGAACAGAACAAGGGAGTAGGGGAGATAGAGGAAATATGTGAAGAACCTGTAGAAGCTGAGAGTGAGTTACGACTAAGAAAGTCAAAGGTGGGGGAAGAGGAGGAGAAAGGGAAAGCTAGATTCATTTCAGAGATAGTTCCAGCAGCAGAGGCTGCACCAAAGACGCTAATGAACTTTGGTCTGCGATGGCCAACTGCTGTGCGGCCAGGTGAGACTACTGAATATATAGAAGACAACGAACATGCAGATGAATCCCGCATTGGAAGCTTTCGATGTTCCTGTACCTGCACCAGTACGACGGAACTGGTGACGATGATGCACCTCTACACTCCCATAAATGTCAATGTACCATCATGTAGAACTAAAAATAAATCCCACAGGCAACCAAAGGAAGAAGATAAGACACTTAACACAACTGCTATCAGCCTATCACGTATATTTTCAAGTAGTTCTAATCCTTGTCATTTGGTTGTGGTCTAG 1602 0.4438 MDSESEFSMPNYREREAISYYLRIEHEFMAPKDFYKEARHLQHRKHAVATIARLSQGEVHDAYVAYLAMNYFDRFASTDPFTDVRGSSVTDTVCFVATCCYTLSAKMRTNQFKLHQFQAEKELSFKPNRLMKMEFRILSGLDWRMLSVTPFYFLDHYYPTFKKIGGFKRRSINEIIVQSQGEYHFTQFKPSDIAMSAFLAATYIGYPSKFNAIEKSIDQLGELVGCWSQLVHLCHKRDIEICSASGTVISATKIVAAKPPTQSEEPAAEIETTKSEEELAELVELQINEYGTTKATQFWNTVLDTEEEEENVAPLTRRPRRDRGKEVVEASKEVAEAETDATKQQGQDQEKAVTVADTSDQKKDVEAETKVNPKEQNKGVGEIEEICEEPVEAESELRLRKSKVGEEEEKGKARFISEIVPAAEAAPKTLMNFGLRWPTAVRPGETTEYIEDNEHADESRIGSFRCSCTCTSTTELVTMMHLYTPINVNVPSCRTKNKSHRQPKEEDKTLNTTAISLSRIFSSSSNPCHLVVV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03509 533 Pfam Cyclin, N-terminal domain 17 145 IPR006671 -
Pumo4g03509 533 MobiDBLite consensus disorder prediction 355 374 - -
Pumo4g03509 533 SUPERFAMILY Cyclin-like 13 145 IPR036915 -
Pumo4g03509 533 Gene3D - 31 146 - -
Pumo4g03509 533 MobiDBLite consensus disorder prediction 310 345 - -
Pumo4g03509 533 CDD CYCLIN_AtCycD-like_rpt2 148 217 - -
Pumo4g03509 533 PANTHER CYCLINS 13 232 IPR039361 -
Pumo4g03509 533 MobiDBLite consensus disorder prediction 309 374 - -
Pumo4g03509 533 Coils Coil 327 347 - -
Pumo4g03509 533 Gene3D - 22 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03509 Pumo-Chr4 73378536 73381341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03509 41 255 Core Cell Cycle Gene Families AT4G03270 28.634 2.87e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03509 - K18812 gmx:102662808 566.229