Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03497 ATGACTCTCAGCACTTTTGGGAACCTAGAGAGCACACCGGAGCGGCTAGAAGTGATTTTCAACATTATTGTGTTGACTAGTGGCCTCCTTCTAGTGACTATGCTGATTGGCAACATCAAGGTGTTTTTGCATGCGACAACATCGAAGAAGCAAGCAATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGCAAGAGGCGATTGCCACAAGGGTTCCGGCAGCGCGTGAGAAGCTATGAGCGGCAGCGTTGGGCTGCCACGCGCGGGGTTGATGAAGGCCTGATGATAAAAAATCTCCCTGAGGGACTAAGAAGGGACATCAAGTACCATCTTTGTTTGGATTTGGTGAGACAGGTGCCACTATTTCAGCACATGGATGAGTTGGTGCTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCCCAAAAGGAGAAACAATAACCAGAGAAGGAGACCCAGTTCAAAGAATGATATTTGTGGTAAGGGGTCACCTTCAGAGCAGCCAAGTCCTACGAGACGGTGTGAAGAGTTGCTGCATGTTAGGCCCTGGGAACTTCAGCGGTGACGAGCTTCTTTCATGGTGTCTGAGAAGGCCCTTTATAGAGCGTCTTCCACCATCTTCATGCACATTGGTGACACTCGAAACCACCGAGGCATTCGGGCTCGAGGCACAGGACGTGAAGTACGTGACGCAGCATTTTAGGTACACGTTTGTGAAGGAAAAGGTTAAGAGGAGTGCGAGGTATTACTCACCAGGGTGGAGAACTTGGGCTGCAGTGGCCATTCAGTTGGCTTGGAGGAGGTATAGGCACCGTTTGACTTTGACTTCTTTGTCCTTTATAAGGCCCCGCAGGCCTGTCTCAAGGTGTGCTTCCTTGGAAGAGGATAGGCTTCGTTTGTATACGGCTATGTTAACCTCACCCAAGCCTAATCAGGATGACTTTGACTTCTGA 960 0.4906 MTLSTFGNLESTPERLEVIFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGFRQRVRSYERQRWAATRGVDEGLMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLVFPKGETITREGDPVQRMIFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAQDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPVSRCASLEEDRLRLYTAMLTSPKPNQDDFDF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03497 319 ProSiteProfiles cAMP/cGMP binding motif profile. 122 201 IPR000595 -
Pumo4g03497 319 Pfam Cyclic nucleotide-binding domain 142 230 IPR000595 -
Pumo4g03497 319 SUPERFAMILY cAMP-binding domain-like 48 236 IPR018490 -
Pumo4g03497 319 Gene3D Jelly Rolls 120 238 IPR014710 -
Pumo4g03497 319 FunFam cyclic nucleotide-gated ion channel 4 120 238 - -
Pumo4g03497 319 SMART cnmp_10 122 251 IPR000595 -
Pumo4g03497 319 CDD CAP_ED 122 228 IPR000595 -
Pumo4g03497 319 Gene3D Helix hairpin bin 47 113 - -
Pumo4g03497 319 FunFam Cyclic nucleotide-gated ion channel 1 49 113 - -
Pumo4g03497 319 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03497 Pumo-Chr4 73058866 73062523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03497 1 318 Ion Channels AT5G54250 88.994 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03497 K05391 - gmx:100800795 610.912