Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03492 ATGGCATCAACATTGATGGCAGCCACAGCAAGTTCTGGCACTCTTAAACAAACTCCTTTCCTTGGCCAAGGCAAGGGTGCCAACGCCAATGCTCTTAGGGATGTTGTTGCCATGGGAACTGGGAAGTACACCATGGGCAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACTCCTTCATACTTGAAAGGAGAATTCCCAGGGGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCAGAAGCATTTGCCAAGAATAGGGCTCTTGAGGTGATCCATGGGCGATGGGCCATGCTTGGAGCACTAGGATGCATCACCCCAGAGGTGCTACAGAAGTGGCTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCTGGATCCCAAATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCACAAAGCATCCTGGCAGTGCTGGGCTTCCAAGTTGTTCTGATGGGCCTTGTTGAAGGGTACCGCATCAATGGGCTTGATGGGGTGGGAGAGGGCAATGACCTCTACCCTGGGGGCCAGTACTTTGACCCTCTTGGCCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAAGTCAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGTTTCTTTGTCCAAGCCATTGTCACTGGAAAAGGCCCATTGGAGAACCTTTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCTACTAAGTTTGCCCCCGGATCTTAA 807 0.5043 MASTLMAATASSGTLKQTPFLGQGKGANANALRDVVAMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03492 268 Gene3D Chlorophyll a/b binding protein domain 57 261 - -
Pumo4g03492 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 14 267 IPR001344 GO:0009765|GO:0016020
Pumo4g03492 268 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Pumo4g03492 268 FunFam Chlorophyll a-b binding protein, chloroplastic 57 261 - -
Pumo4g03492 268 SUPERFAMILY Chlorophyll a-b binding protein 49 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03492 Pumo-Chr4 73006495 73008230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03492 11 267 Chloroplast and Mitochondria Gene Families AT2G05070 68.045 1.05e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03492 K08914 - gmx:100779387 535.413