Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03491 ATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACATCCTGGAATATATGATGAAGATCTTGTGCTACAACAGCTGAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGAATGACACATCAAGAGTTTTCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCAAACACATCTCAGGATCCATTGAGCATTTCAGTTGCTGTTTTGCAACAGTTTAATATCCCTCCCGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGATTGGGGCACTGGAGGACAGGAGAAAACATCTTTTGCAGGGAATACTTGGGATTCAAAAAAGCTTTCGTGGTTATCAAGCTCGTCGTCATTACCATGAACTTAAGAATGGAGTGACTACTTTACAATCATTTGTTCGTGGAGAAATTGCAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCTATGACTATTTCTTCTGAAAATATTGTGGAGATACAAGCAGCCACAACACTACAATCTGTAATTCGTGGCTGGCTGGTTCGGAGGCATTCTAGTGGCTTGAATAAGTCAAAGAAATCTCCTGAAAATGCAAGATCTAGACGAAGGTCACGTGTGAAGATGCCTGAAGTAAAGGATGTGTCCGGTGAGCGTGGCCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAAAGGCGGGTTATCAAGGCTGAAGCTACCATAGAGCAAAAGGAGGAGGAAAATGCTGAATTGAAGGAACAGCTAAAACAATTTGAGAGAAGGTGGATTGAATACGAGAAAAAGATGAAATCAATGGAGGAGATGTGGCAAAAACAGATGGCATCTTTGCAAATGAGCCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAGCAGTCAAATTGCTAGACGTGATGTTGCGTCACATTTCGGCTATGATTCGGAAGATGCTACTTCTGTGGGATCTCGAACTCCTCGAACGCCTGGTGCTACCACACCTTTGAAGTATTCTAGTAGTCTTACTGAAGCTGGAACAGGGAGAGATGCTAACGGTACTTTGGCTTCAGTCAGCAACCTGATGAAGGAATTTGAGCAACGCAGACATACCTTTGATGATGATGCCAGAGCTCTGGTTGAGGTTAAAACGGGTCAATCTGCTAACACGAATTCCGTTGAAGAACTTCGGAAACTCAAACATAGGTTTGAGGGGTGGAAGAAAGAATACAAGACTAGACTAAGAGAGACAAAAGCAAGACTTAATAAATCAGAAATGGATAAAAGTCGGCGGAGATGGTGGGGGAAATTGAGTTCTAGAGCACTATAG 1368 0.432 MHQLESTTPHFIRCIKPNTKQHPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLSEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKHLLQGILGIQKSFRGYQARRHYHELKNGVTTLQSFVRGEIARREYGVMVKSSMTISSENIVEIQAATTLQSVIRGWLVRRHSSGLNKSKKSPENARSRRRSRVKMPEVKDVSGERGQNLPSALAELQRRVIKAEATIEQKEEENAELKEQLKQFERRWIEYEKKMKSMEEMWQKQMASLQMSLAAARKSLASENASSQIARRDVASHFGYDSEDATSVGSRTPRTPGATTPLKYSSSLTEAGTGRDANGTLASVSNLMKEFEQRRHTFDDDARALVEVKTGQSANTNSVEELRKLKHRFEGWKKEYKTRLRETKARLNKSEMDKSRRRWWGKLSSRAL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03491 455 ProSiteProfiles IQ motif profile. 119 148 IPR000048 GO:0005515
Pumo4g03491 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 166 IPR027417 -
Pumo4g03491 455 ProSiteProfiles IQ motif profile. 142 171 IPR000048 GO:0005515
Pumo4g03491 455 MobiDBLite consensus disorder prediction 200 232 - -
Pumo4g03491 455 Gene3D - 51 118 - -
Pumo4g03491 455 Coils Coil 240 288 - -
Pumo4g03491 455 Gene3D - 123 169 - -
Pumo4g03491 455 ProSiteProfiles IQ motif profile. 179 208 IPR000048 GO:0005515
Pumo4g03491 455 MobiDBLite consensus disorder prediction 328 366 - -
Pumo4g03491 455 Gene3D Kinesin motor domain 8 50 IPR036961 -
Pumo4g03491 455 Pfam IQ calmodulin-binding motif 146 162 IPR000048 GO:0005515
Pumo4g03491 455 Pfam IQ calmodulin-binding motif 181 198 IPR000048 GO:0005515
Pumo4g03491 455 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Pumo4g03491 455 Pfam Myosin head (motor domain) 1 105 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03491 455 PANTHER MYOSIN 1 440 - -
Pumo4g03491 455 SMART iq_5 141 163 IPR000048 GO:0005515
Pumo4g03491 455 SMART iq_5 178 200 IPR000048 GO:0005515
Pumo4g03491 455 SMART iq_5 118 140 IPR000048 GO:0005515
Pumo4g03491 455 ProSiteProfiles Myosin motor domain profile. 1 117 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03491 455 MobiDBLite consensus disorder prediction 330 366 - -
Pumo4g03491 455 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03491 Pumo-Chr4 72996566 73001097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03491 1 449 Myosins gene family AT5G54280 54.881 3.39e-169 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03491 K10357 - gmx:100801876 833.172