Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03490 ATGGGGCACAGAAGGAAGGGTAGTTTTGGGTGCAAGAAGGTGAAGTTGAATGTGGAATCCCCTTATGAAGTCAAATCAGAAGAGAAAGTGAGTGAACAATTGTCACCGGGTCCAGTTTCTACATCCAATGATTCTTCTACTGATTTGGAAGCTCCTCCTCCGTCCGGGGAGTTGGAGGATGATAATGTTGCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAAAGGAAAGTGGGAGCTAGGAACGATACAGTCAACTTCAGGAGAGGAAGCATCTGTTTCACTCTCAAATGGAAATGTTATGAAAGTAGCCAGATCAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGTGTCGAAGATCTTATACAGCTCAGTTATTTAAATGATCCCTCAGTTCTTCACAATCTTCAGTTTAGATATTCTCAGGATATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAGATGTCCAGGTTTATGGAAACGATTATATCTCAGCATATAGGGAGAAACTTATGGATAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAATGAGATGATGAGAGATGAAGCGAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAAACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCTGTTCTGGAATAGAAAATGAAATTCTTCAGACAAATTTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTTGTGGGGCAAAAATTCAAACTTGTAAGAATGTTCGATCAAGAGTTGTTCAACTTGCCTGTGGCGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAAAGACTGAATCTTAGGGCGGCTAGTGAATATAAATATCTTAACCAGAGTGACTGCATCACAATTGATGGTGTTGATGATGCTAAAAAGTTTCATAAGCTGATGAAAGCATTGGATGTTATTCGAATGTGCAAAGAGGATCAAGAGCTTGTTTTTAAGATGCTGGCTGCGGTATTATGGTTGGGAAATATATCATTCCAAGATACTGACAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACAAATGCTGCTTTGCTAATGGGTTGCAGTTCCCATGAGCTAATGGAAGCATTATCTACCCACAAAATCCAAGCTGGCAAGGATACTATTACCAAGACATTGACCTTGCGGCAGGCAATCGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAACTTGTTTGATTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTGGGTAAACGACGTACTGGCAGATCCATAAGTATCCTTGATATTTATGGGTTTGAGTCATTCCAGAATAATAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAAGAGGACTACGAATTAGATGGCATTGATTGGACAAAAGTAGAATTTGAGGACAATCAAGTGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTATTCTCTTTGTTGGACGAGGAATCAAATTTCCCCAGAGCCACTGATCTAACACTTGCCAACAAACTTAAGCAGCACCTGCACGCTAATCCTTGCTTTAAAGGGGAAAGGGGCAGGGCTTTTAGTGTCTGTCATTATGCAGGGGAGGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAACAGAGATCCATTACCATCTGATTCCATTCAACTACTATCATCAGTGTAG 1890 0.3942 MGHRRKGSFGCKKVKLNVESPYEVKSEEKVSEQLSPGPVSTSNDSSTDLEAPPPSGELEDDNVAYFIKKKLHVWCRQPKGKWELGTIQSTSGEEASVSLSNGNVMKVARSELLPANPDILEGVEDLIQLSYLNDPSVLHNLQFRYSQDMIYSKAGPILIALNPFKDVQVYGNDYISAYREKLMDSPHVYAMADAAYNEMMRDEANQSIIISGESGSGKTETAKIAMQYLAALGGGCSGIENEILQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTMGKICGAKIQTCKNVRSRVVQLACGERSYHIFYQLCAGSSSDLKERLNLRAASEYKYLNQSDCITIDGVDDAKKFHKLMKALDVIRMCKEDQELVFKMLAAVLWLGNISFQDTDNENHIEVVNDEAVTNAALLMGCSSHELMEALSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYANLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVEFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDLTLANKLKQHLHANPCFKGERGRAFSVCHYAGEVLYDTSGFLEKNRDPLPSDSIQLLSSV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03490 629 CDD MYSc_Myo8 135 628 IPR036022 -
Pumo4g03490 629 PANTHER MYOSIN 114 628 - -
Pumo4g03490 629 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 68 117 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 Gene3D - 304 360 - -
Pumo4g03490 629 Pfam Myosin head (motor domain) 123 627 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 PRINTS Myosin heavy chain signature 248 275 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 PRINTS Myosin heavy chain signature 533 561 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 PRINTS Myosin heavy chain signature 151 170 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 PRINTS Myosin heavy chain signature 205 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 FunFam Myosin heavy chain 304 360 - -
Pumo4g03490 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 627 IPR027417 -
Pumo4g03490 629 SMART MYSc_2a 115 628 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 MobiDBLite consensus disorder prediction 22 58 - -
Pumo4g03490 629 Gene3D Kinesin motor domain 120 491 IPR036961 -
Pumo4g03490 629 ProSiteProfiles Myosin motor domain profile. 121 629 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo4g03490 629 FunFam Myosin IE heavy chain 361 469 - -
Pumo4g03490 629 Gene3D Myosin VI head, motor domain, U50 subdomain 361 469 - -
Pumo4g03490 629 Gene3D - 492 628 - -
Pumo4g03490 629 MobiDBLite consensus disorder prediction 33 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03490 Pumo-Chr4 72990535 72996207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03490 5 628 Myosins gene family AT5G54280 72.364 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03490 K10357 - gmx:100801876 1177.16