Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03470 ATGTGTTGCCGCTGTTGGCTTGAGAGAGTCGTTGCAGTGGTTTCTCCGTTATTGAAGTTGACTTCCTTCGATGTCGCCGCCGTGGTAGTTTCGTCGGTGTTAGCTCTTGGTGATAATGGCGGTGTGTTGGAGGTAGACATGGATCATCATGATCAAGAGATAGAAGACATAGAGTCACAAACTGTGGAAACCCCTGACATGCTCCACAAAGGAAAACGTCAAGTAATTCTTAAGTTTGATGATGTTGTGTATAAAATTAAGACCAAGAAAGGTGGACTATTTGTGAAGAACAGAAAGACAGAAGAAAAAGAGATACTGAAGGGAGTGACAGGTGTTGTTGAGCCTGGTGAAATGCTAGCCATGTTAGGTCCATCTGGGAGTGGCAAAACAACTCTGCTCACAGCATTGGGAGGAAGGCTTGGAGGGAAGCTATATGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATGCCATGAAGAGGAACACTGGCTTTGTTACCCAAGATGATGTTCTCTACCCCCACTTGACTGTGACTGAGACCCTAGTGTTCACTGCACTTCTCAGGTTGCCCAACAGTATCTCCAATGAAGAGAAAGTTAAGCATGCAAAAGCTGTGATTGATCAACTTGGTTTAACCATGTGCAAGGATAGCATAGTTGGAAGCCCTTACTTGAGGGGGGTTTCTGGGGGAGAGAGAAAAAGGGTTAGCATTGGACAAGAACTACTCATAAACCCAAGCTTGTTGTTTCTTGATGAACCTACCTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACCTTGTGGGAGCTTGCAAGTGGAGGGAGAACTGTTGTGATGACAATACACCAACCTTCAAGTAGGCTATACTACATGTTCCATAAGGTGTTGTTGCTATCAGAAGGGAACTCATTGTACTTTGGGAATGGATCTGAAGCCATTGAATATTTCTCTAATATTGGATATGCCCCAGCATTGGCCATGAACCCTGCAGACTTCCTTTTGGATATTGCAAACGTCACTTTTGCTGAGTGTGGAATAACTGCAGGTATCTACACTGATGAGTTTAATGCGGATCATGCCATAGATAAACAGAAATTGATTTCGGTGTGCAAGAGAAACTATGCTGCAGAATTGAAGCCAGCAGCACTTCAAGGAATCAATGACTCTGGTAAAAGCCAGAATAGATTTCAAGAAAAGGGTTCTGAAAAATGGCCTACCAGCTGGTCACAGCAATTCTATGTGCTGTTAAGAAGAGACATCAAAGAGAGAAAGCATGAATCATTCTCTGGTTTGCGGGTTGGTCAGGTCCTTGTGGTTGCTCTTATCGCAGGACTACTGTGGTATAAGTCTGATGTCTCACACCTGCAGGATCAGATTGGGCTTCTATTCTTCATATCTGGCTTTTGGAGTTTCTTCCCTCTCTTTCAAGCAATTTTCACATTTCCCCGAGAGCTATTGATGCTAGAGAAAGAAAGATCTTCTGGAATGTACAGGCTCTCCTCATACTTCATGTCAAGGGTGGTAGCTGACCTTCCCATGGAACTTATTCTTCCCACCACATTTATTCTCATAACCTATTGGATGGCAGGGTTGAAAGCCAACATACTCAACTTCTTCTACACATTGCTCACCCTCTTGCTCCATGTGATAGTCTCACAAGGCCTAGGCCTTGCCCTTGGTGCTTCTGTGATGGATCAAAAATCCGCAACCACGCTTGCCTCAGTGATCATGCTGTGTTTCTTGCTGGCTGGTGGTTTCTATGTTCAGCATGTTCCAATGTTCATTTCATGGGTGAAGTACATCTCCATCAGCTACTACAACTACCAGCTCTTCATTGCTTCTCAGTATAGCTATGGTGAGACATACCCTTGTTCTAATGGCCAGTGTTTAGTTGCGGAATTTCCTTCTATAAAGCAAACAGGGTTTCATTTTAATCTGCATGAGCAAGTCATGGCTGTGTCAGCTCTGGTGATAATGCTGATAGGTTACAGACTCATAGCATATCTTGCTCTTATGAGGATTGGAGTGACAAAGAACTAG 2049 0.4383 MCCRCWLERVVAVVSPLLKLTSFDVAAVVVSSVLALGDNGGVLEVDMDHHDQEIEDIESQTVETPDMLHKGKRQVILKFDDVVYKIKTKKGGLFVKNRKTEEKEILKGVTGVVEPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGSITYNGEAFSNAMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSISNEEKVKHAKAVIDQLGLTMCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELASGGRTVVMTIHQPSSRLYYMFHKVLLLSEGNSLYFGNGSEAIEYFSNIGYAPALAMNPADFLLDIANVTFAECGITAGIYTDEFNADHAIDKQKLISVCKRNYAAELKPAALQGINDSGKSQNRFQEKGSEKWPTSWSQQFYVLLRRDIKERKHESFSGLRVGQVLVVALIAGLLWYKSDVSHLQDQIGLLFFISGFWSFFPLFQAIFTFPRELLMLEKERSSGMYRLSSYFMSRVVADLPMELILPTTFILITYWMAGLKANILNFFYTLLTLLLHVIVSQGLGLALGASVMDQKSATTLASVIMLCFLLAGGFYVQHVPMFISWVKYISISYYNYQLFIASQYSYGETYPCSNGQCLVAEFPSIKQTGFHFNLHEQVMAVSALVIMLIGYRLIAYLALMRIGVTKN 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03470 682 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524|GO:0016887
Pumo4g03470 682 Gene3D - 94 322 IPR027417 -
Pumo4g03470 682 FunFam ABC transporter G family member 22 93 322 - -
Pumo4g03470 682 Pfam ABC transporter 106 256 IPR003439 GO:0005524
Pumo4g03470 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 328 IPR003439 GO:0005524
Pumo4g03470 682 Pfam ABC-2 type transporter 285 340 IPR043926 GO:0140359
Pumo4g03470 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 671 - -
Pumo4g03470 682 SMART AAA_5 115 305 IPR003593 GO:0016887
Pumo4g03470 682 Pfam ABC-2 type transporter 413 619 IPR013525 GO:0016020|GO:0140359
Pumo4g03470 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03470 Pumo-Chr4 72697057 72706979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03470 104 333 Calmodulin-binding Proteins AT2G36910 27.966 3.95e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03470 K05681 - gmx:100816135 1090.87