Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03422 ATGACTACCAGAGAAATCCTTCAAAAAATGAAGGTAAAAGTTGGTTTGGGTTCATCAGACCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGAACATAACTCATGGCTTTCACTTGGTAAAAGGAAAATCATATCATGACATGGAGGATTATGTTGTTGCTCAATTTAAGCAAGTAGATAGCAATGAATTGGGTTTGTTTGCAATATTTGATGGCCATGCGGGTCACAATGTACCTAATTACTTGCGGTCTCATTTGTTTGATAATATCTTACAAGAGCCTGACTTCTGGAAAGAACCTGCAGATGCTGTCAAGAGAGCATACAGTAAAACTGATTCTAATATTTTAGAGATGTCGGGTGAATTAGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTAGTCAATTGTCAGAAGTTAATAGTAGCCAACATTGGGGATTCTCGGGCCGTCTTATGCAAGAAGGGTGTGGCCAAACAACTATCAGTGGATCATGAGCCAACCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTGTCAAACTTTCCAGGGGATGTTCCTCGTGTTGATGGACGGCTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCATTTGTGACACTGGAGATTATAGATGATGATGCAGAGTTAGTTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATTGTATCAGAAATATAAAGGATGCTCGGTCTTCAGCAAAGCGCCTTACTGAAGAAGCAGTTAGCAGGAAAAGCACAGATGATATCTCCTGCATTGTTGTGAAATTTCAGTGA 852 0.4014 MTTREILQKMKVKVGLGSSDPDSGKGKSKMSKNITHGFHLVKGKSYHDMEDYVVAQFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFDNILQEPDFWKEPADAVKRAYSKTDSNILEMSGELGRGGSTAVTAILVNCQKLIVANIGDSRAVLCKKGVAKQLSVDHEPTTEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTLEIIDDDAELVILASDGLWKVMSNQEAVNCIRNIKDARSSAKRLTEEAVSRKSTDDISCIVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03422 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Pumo4g03422 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Pumo4g03422 283 CDD PP2Cc 36 282 IPR001932 -
Pumo4g03422 283 PANTHER PROTEIN PHOSPHATASE 30 282 IPR015655 GO:0004722|GO:0006470
Pumo4g03422 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Pumo4g03422 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Pumo4g03422 283 SMART PP2C_4 25 280 IPR001932 -
Pumo4g03422 283 Gene3D - 30 283 IPR036457 -
Pumo4g03422 283 Pfam Protein phosphatase 2C 48 275 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03422 Pumo-Chr4 71851695 71854770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03422 1 283 PP2C-type Phosphatase Gene Family AT3G15260 73.356 4.40e-160 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03422 K17506 - gmx:100500617 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03422 4 71851695 71854770 Pumo4g03422 4 71851695 71854770 ECH