Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03421 ATGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGTATGCTATGCTATGCTTCTCTCTCTTTCATTTCATTCTCTCTTTCTCTCTCTAACTCTAACCTCTTTCCTCAACTGGGTCTTGTCCATTTCTCTCAGGAGAGTCCGAGGTGGTAATAGCTGCAAGGTCGGAGATGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGAAGTTCAGGATGTCTGGAAGATATTGATGGAGAGGATCCTGTCAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCGAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTACTGAATGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTTATTCAAGCTGGACATGGCCTTCTCCAACTTGGCTCTTGCAAGATTATTCCTGAAGATCTCCATTTTGTGCTTAGAATGAGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACACTTCCTCATCAACTTCTGTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCCCCTCCACTCTTCAACTGGGGTCAGAGGCCACTTTCTTCTGCCACTTCCATGCTATCCTCACCCAGTTTTCAACAACATGCAGCTAGGCTTGGCTTTCCAAAAGATGAGGCACACATGTTTCTCATGCCTCATGCATCATCCGAGGGTGCAAGAATCGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACAGATGATGCTAATAAGCTTGTGTTCAATCCTGAGAGCTTGGGGAACAAACCAGGTGATCAAAATCAGCATCACACTCTTAGCCAAAACCCCAATTCAGAAGCCTCCAACATGCAAAATACTAGTGGAACCAACCCAAATGAGTTCTTGAGCTTGGATAGCCACCAAGAAGATGCAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTTCCTGCAAGAGTGGCCTCATCATCTTCATCCACTTCAATGGATCACCACCAACAAGGTGTGGAGTATAGGAATTCAGAAGGAGGTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1251 0.4548 MDLLCLLDHSSSPVCYAMLLSLSFHSLFLSLTLTSFLNWVLSISLRRVRGGNSCKVGDDNGSLMLMWEDGFCRGRSSGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPTEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPIRPPPPLFNWGQRPLSSATSMLSSPSFQQHAARLGFPKDEAHMFLMPHASSEGARIEDMMGEHENDIKWPNGLSFFNALTGRTDDANKLVFNPESLGNKPGDQNQHHTLSQNPNSEASNMQNTSGTNPNEFLSLDSHQEDARKMDKFKRSFTLPARVASSSSSTSMDHHQQGVEYRNSEGGMYPDVMETFLE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03421 416 MobiDBLite consensus disorder prediction 313 356 - -
Pumo4g03421 416 MobiDBLite consensus disorder prediction 321 356 - -
Pumo4g03421 416 PANTHER GB|AAF34833.1 46 416 IPR044170 -
Pumo4g03421 416 MobiDBLite consensus disorder prediction 209 230 - -
Pumo4g03421 416 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 89 189 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03421 Pumo-Chr4 71834764 71837710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03421 87 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 35.294 1.21e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03421 - - gmx:100814723 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03421 4 71834764 71837710 Pumo4g03421 4 71834764 71837710 ECH