Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03400 ATGAAGAAACCGAAGCAAACTCAGTTGAACCCCAATTGGGTTCAACTTCAACAAAAGCTGAAGCTGAATGGCTCTAAGGCTTCAAGGACCTTCAAAAATTCAGATGACGACACCCCAAAATCAATATTGGGGAAACGTAAAGAGAGACCAGATGATGAATCCAATGATTGTCAGATTAATCCTCTTGTTCCTGTAAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTCGGCGTAGGTCAAGGGAACAAAAGTGCCCTTGGAAGAGTAACACTGGTCAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTCCGGCCAATTGAGCGAGTTGTTGATTTCCGCACTAAAATTAGTGGCATAAGACCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGATTGCTCAGAAGAAAGTGGCGGAGTTGATCAATGGAAGGATCCTTGTTGGTCATGCCCTGTCCAATGATCTTAAGGCATTATTATTAAGTCATCCCAAAAAGGATATACGGGATACCTCCAAGTACCAACCATTTCTAAAGTGCTGTCACCTTACCGCTTCTTCTACCTATTTTGTTTTTTAA 597 0.4137 MKKPKQTQLNPNWVQLQQKLKLNGSKASRTFKNSDDDTPKSILGKRKERPDDESNDCQINPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWIAQKKVAELINGRILVGHALSNDLKALLLSHPKKDIRDTSKYQPFLKCCHLTASSTYFVF 198
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03400 198 SMART exoiiiendus 73 192 IPR013520 -
Pumo4g03400 198 Pfam Exonuclease 75 162 IPR013520 -
Pumo4g03400 198 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 32 183 IPR047021 GO:0004527
Pumo4g03400 198 Gene3D - 69 195 IPR036397 GO:0003676
Pumo4g03400 198 MobiDBLite consensus disorder prediction 24 62 - -
Pumo4g03400 198 CDD REX4_like 75 185 IPR037431 GO:0006364|GO:0008408
Pumo4g03400 198 MobiDBLite consensus disorder prediction 30 55 - -
Pumo4g03400 198 SUPERFAMILY Ribonuclease H-like 74 179 IPR012337 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03400 75 197 C2H2 Transcription Factor Family AT3G27970 38.406 8.96e-22 89.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03400 K18327 - gmx:100819122 360.533