Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g03400 | ATGAAGAAACCGAAGCAAACTCAGTTGAACCCCAATTGGGTTCAACTTCAACAAAAGCTGAAGCTGAATGGCTCTAAGGCTTCAAGGACCTTCAAAAATTCAGATGACGACACCCCAAAATCAATATTGGGGAAACGTAAAGAGAGACCAGATGATGAATCCAATGATTGTCAGATTAATCCTCTTGTTCCTGTAAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTCGGCGTAGGTCAAGGGAACAAAAGTGCCCTTGGAAGAGTAACACTGGTCAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTCCGGCCAATTGAGCGAGTTGTTGATTTCCGCACTAAAATTAGTGGCATAAGACCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGATTGCTCAGAAGAAAGTGGCGGAGTTGATCAATGGAAGGATCCTTGTTGGTCATGCCCTGTCCAATGATCTTAAGGCATTATTATTAAGTCATCCCAAAAAGGATATACGGGATACCTCCAAGTACCAACCATTTCTAAAGTGCTGTCACCTTACCGCTTCTTCTACCTATTTTGTTTTTTAA | 597 | 0.4137 | MKKPKQTQLNPNWVQLQQKLKLNGSKASRTFKNSDDDTPKSILGKRKERPDDESNDCQINPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWIAQKKVAELINGRILVGHALSNDLKALLLSHPKKDIRDTSKYQPFLKCCHLTASSTYFVF | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g03400 | 198 | SMART | exoiiiendus | 73 | 192 | IPR013520 | - | |
Pumo4g03400 | 198 | Pfam | Exonuclease | 75 | 162 | IPR013520 | - | |
Pumo4g03400 | 198 | PANTHER | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED | 32 | 183 | IPR047021 | GO:0004527 | |
Pumo4g03400 | 198 | Gene3D | - | 69 | 195 | IPR036397 | GO:0003676 | |
Pumo4g03400 | 198 | MobiDBLite | consensus disorder prediction | 24 | 62 | - | - | |
Pumo4g03400 | 198 | CDD | REX4_like | 75 | 185 | IPR037431 | GO:0006364|GO:0008408 | |
Pumo4g03400 | 198 | MobiDBLite | consensus disorder prediction | 30 | 55 | - | - | |
Pumo4g03400 | 198 | SUPERFAMILY | Ribonuclease H-like | 74 | 179 | IPR012337 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g03400 | 75 | 197 | C2H2 Transcription Factor Family | AT3G27970 | 38.406 | 8.96e-22 | 89.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g03400 | K18327 | - | gmx:100819122 | 360.533 |