Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03397 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTACCCTCAATGGCTAACTTCAACCCCACAACCTCAACCACCACCACCGTTGCCGCCACCACCACCGCTCCCCCGCCGCCTTCATGGGTCGACGAGTTCCTCGATTTCTCGTCAGCCCGGCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTACCTTCCTCGAGACGCCGTTTCTCGAGGAATGCCGAGCCGGGTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCCGACGACATTGCAGCCGCTGCGCTCCCGCCGCCGCCGCTGTCGTCGGCCTCCAATCCCTCCTCGCCGGCCTCCGACCAGAATAGCAACGAGGAGAAGCCGATGGCAATGGCGCTGGACGTGAAGCCGAAGACGGAAAGCGTTGAAGAGGAAAGCTCGTGCAAGAATGAAGCGGCGGCGGCGCCACCCTCCGCCACCGCCTGCACTGAAACCGTTGTTGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCTCAGAGGTCAAGGGTACGAAAGCTACAGTACATTTCTGAGCTTGAAAGGAGCGTAACAACTTTGCAGACGGAGGTATCAGCATTGTCACCGCGAGTTGCATTCCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCACCAAGAGGCATTAAAGAAGGAAATAGAGAGACTGAGGCAAATCTATCACCAACAGAACCTACAAAAGATGAACAACCACAACAACAATAATAATCTTCAAACCCCACCAACATCACAGCCACAACAACAACAACCAATGCAACTGCATCAGCATCATCATCAGCAGCAGCAGCAGATAACAGTGTCTCAACCATTGGGATGCAAGGACAATAAGGAGCAGCTCCTGAGTTGA 996 0.5331 MAQLPPKIPTIPQNWPSFPHQRVPSMANFNPTTSTTTTVAATTTAPPPPSWVDEFLDFSSARRGAHRRSASDSITFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPASDQNSNEEKPMAMALDVKPKTESVEEESSCKNEAAAAPPSATACTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMNNHNNNNNLQTPPTSQPQQQQPMQLHQHHHQQQQQITVSQPLGCKDNKEQLLS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03397 331 MobiDBLite consensus disorder prediction 278 331 - -
Pumo4g03397 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Pumo4g03397 331 SMART brlzneu 173 237 IPR004827 GO:0003700|GO:0006355
Pumo4g03397 331 MobiDBLite consensus disorder prediction 138 154 - -
Pumo4g03397 331 MobiDBLite consensus disorder prediction 278 324 - -
Pumo4g03397 331 SUPERFAMILY Leucine zipper domain 177 231 IPR046347 GO:0003700|GO:0006355
Pumo4g03397 331 CDD bZIP_plant_RF2 178 228 IPR044759 GO:0003700|GO:0006355
Pumo4g03397 331 Coils Coil 256 276 - -
Pumo4g03397 331 FunFam Basic leucine zipper 61 176 249 - -
Pumo4g03397 331 PANTHER BASIC LEUCINE ZIPPER 34 1 303 - -
Pumo4g03397 331 MobiDBLite consensus disorder prediction 109 161 - -
Pumo4g03397 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 227 IPR004827 GO:0003700|GO:0006355
Pumo4g03397 331 Gene3D - 176 248 - -
Pumo4g03397 331 Pfam bZIP transcription factor 177 221 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03397 Pumo-Chr4 71544680 71547953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03397 1 255 bZIP Transcription Factor Family AT3G58120 52.759 2.01e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g03397 bZIP_1 8.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03397 - - gmx:100820197 461.84