Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03356 ATGAACAACAACTCTTCTCCTTGTGTGGCCTTCGGGGAGTTCTACGAGTCATGGTTCGAGGAGCTGCAGCAGGTGGTGCAGCAGCTGAGGAGTGACCGAAAGGAGGAGGTGATGGAGAAGGTGATGTGTCACCACCAGAACTACTACAGAGCAAAATCGGTGGCGGCGGAGAAGGACCCTCTCAACGTGTTCCTCTCTCCCTGGGCCACCACGCTGGAACGCTCCCTCCACTGGATCACCGGCTGGCGCCCCACCACCGCGTTTCACCTCATCTACACCGAGTCCTCGCTCCTCTTCGAGTCCCACATCATCGACATCCTCCAGGGCCTCCGCACCGGCGACCTCGGCGACCTCTCTCCCTCCCAGTTCCGCCGCATCAGCGACCTCCAGTGTGACACTGTGAAGGAAGAGAATGCAATAACAGAGGAGTTATCAGAGTGGCAGGACAGCAGTGTAAGCGAGATGATGGGCCCGGGCGCTGACATCAACGAGAAGATCGGACGGCTGGTATGCATTATAAAAAAAGCAGACGATCTACGGCTGAGAACGCTGCGGAGCGTCGTGGGGCTACTTTCGCCGCAGCAGGCTATCGAGTTCTTGATTGCCTCCACGGAGTTGCTCGTTGGGATACGTGGTTGGGGATTGAATCACGACCGTCCATGTCGCAGATGA 672 0.5759 MNNNSSPCVAFGEFYESWFEELQQVVQQLRSDRKEEVMEKVMCHHQNYYRAKSVAAEKDPLNVFLSPWATTLERSLHWITGWRPTTAFHLIYTESSLLFESHIIDILQGLRTGDLGDLSPSQFRRISDLQCDTVKEENAITEELSEWQDSSVSEMMGPGADINEKIGRLVCIIKKADDLRLRTLRSVVGLLSPQQAIEFLIASTELLVGIRGWGLNHDRPCRR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03356 223 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 11 219 - -
Pumo4g03356 223 Coils Coil 19 39 - -
Pumo4g03356 223 ProSiteProfiles DOG1 domain profile. 8 220 IPR025422 GO:0006351|GO:0043565
Pumo4g03356 223 Pfam Seed dormancy control 21 93 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03356 Pumo-Chr4 70959200 70960558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03356 8 202 bZIP Transcription Factor Family AT5G06950 24.201 3.01e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03356 - - gsj:114374825 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03356 4 70959200 70960558 Pumo4g03356 4 70959200 70960558 ECH