Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03339 ATGGAGAATCAGTCTTCAAATGGAAGAAGGGCAATGGAAGAAGAGCTAATCAAAGGGCGTGACATAGCAAATCAGTTACTTGAAGTACTTTTTCTTAAATCCAACACTCATCATCATGGAGATGTAGAACTAGAAGGGTCAATGCTACTACCATATGTTGAAGATCTTGTTCGCAAGGTGCTGTGTTCATTCACAAACACCCTTTTGCTATTGAACACTAATAATGATGTCTCCAATTATGTTGTTATGCCTATCACTATCAAAGATGTCCCTTCGTCCGTGAAATGTCCAGAGCCTCAGGATACGGATGAGGCTTGCAAGAGTTTCTTCCACGCTAAAAAACGAAGAGGGTGCTACAAGAGAAAATCAAATGCACCAACATGGGAGACGAACAGCTCAATTCTGATGGAAGATGGCTATGTATGGAGAAAGTATGGACAAAAAATAACAATGAATGCAAAATACCTCAGGAGCTACTACAGATGCACTCACAAGTATGATGAGGGTTGTCCAGCAATCAAACAGGTTCAGAGAATTCAAGAGGACCCTCCATTGTACCGGACAACTTATTATGGTCATCACAATTGCAAAAGCTCTTTAAGTCCTGAGTTAATGATGGAACCAGCTTCTTCTTCTGGCTCTTCTATGATCCTTAGCTTCAGCAACACCTTCACAAGCAAAGAAGAATACCCATTTTCACCATCACTTTCTTCATCCACAACGAAACAGGAGCCTATGGAAGTGATTCCGGAGGACCATAGTGTTCACAATCAATTACCCTCATCAGATTACCTACTTTTATGTGACTATGAACTTGATTTCAATTATTCGAGGCATGTTACTATGCTATCCTCCACTGAATCTGTTCAATTCGATAAAGTTTATGGGAATTAA 894 0.4004 MENQSSNGRRAMEEELIKGRDIANQLLEVLFLKSNTHHHGDVELEGSMLLPYVEDLVRKVLCSFTNTLLLLNTNNDVSNYVVMPITIKDVPSSVKCPEPQDTDEACKSFFHAKKRRGCYKRKSNAPTWETNSSILMEDGYVWRKYGQKITMNAKYLRSYYRCTHKYDEGCPAIKQVQRIQEDPPLYRTTYYGHHNCKSSLSPELMMEPASSSGSSMILSFSNTFTSKEEYPFSPSLSSSTTKQEPMEVIPEDHSVHNQLPSSDYLLLCDYELDFNYSRHVTMLSSTESVQFDKVYGN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03339 297 Pfam WRKY DNA -binding domain 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03339 297 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 54 222 IPR044810 GO:0003700
Pumo4g03339 297 SMART WRKY_cls 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03339 297 Gene3D WRKY domain 113 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g03339 297 ProSiteProfiles WRKY domain profile. 131 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03339 297 SUPERFAMILY WRKY DNA-binding domain 132 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03339 Pumo-Chr4 70567673 70569110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03339 15 244 WRKY Transcription Factor Family AT3G56400 34.335 4.59e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo4g03339 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03339 - - gmx:102659367 437.187