Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03336 ATGGAGAATCAGATTCCAAATGGAAAAAAGGCAATGGAAGAAGAACTAATCAGAGGGCGTGACATGGCAAATCAGATTCTTGAAGTACTTGCTCATGATAAATCTATCAGTCATCTTGAAAAGAATGAAGGGTCAAAGTCAGTGTTACCAATTGTTGAAGATCTTGTGCGCAAGGTCTTGTGTTCATTCACAAATACCCTTTTGCTTTTGAACTCAAATAACGATGTCTCCAATGAGGTGGTGGCATCTATCACTCCCAAAGATGTCTCTTCGTCCACGAGTTCCCCAAAGATGGAGTCTACGGATGAAACCTGCAAGAGTCCCAACACTAAAACTAGAAGAAGAGGCTACAAGAGAAAATCAATAGCGCCAACTTGGGAGAAAGACAGCTCAATACTGATTGAAGACGGCTATGTGTGGAGAAAGTATGGACAAAAAATGACACTGAACGCCAAATACCTCAGGAGCTACTACAGGTGCACTCACAAGAGTAATCAGGGATGCCAAGCAATGAAACAGGTTCAGAGAATTCAAGATAATCCTCCTTTGTACCGAACAACCTATTATGGCCATCACACTTGTAAAACCCCTATGAATCCCGAGATTATTTTGGAACCTCTTTCTCCTTGTGCCTCTTCCACATTACTTAGCTTTAATAACAGCCTTCAAAGCAAACAAGAAAACCCGTTTCCCTCATCACTATTTGCATCAACGAAACATGAACCCATAGAAGTGATTCACGATGATCATAGTGCTCAAAATCAATTGTCCTCACTCGAAGACCTCCCATTATACGATTATGAAATTTATTTCGACTATTCGATAGAGGCGTGTCGCTAA 840 0.4095 MENQIPNGKKAMEEELIRGRDMANQILEVLAHDKSISHLEKNEGSKSVLPIVEDLVRKVLCSFTNTLLLLNSNNDVSNEVVASITPKDVSSSTSSPKMESTDETCKSPNTKTRRRGYKRKSIAPTWEKDSSILIEDGYVWRKYGQKMTLNAKYLRSYYRCTHKSNQGCQAMKQVQRIQDNPPLYRTTYYGHHTCKTPMNPEIILEPLSPCASSTLLSFNNSLQSKQENPFPSSLFASTKHEPIEVIHDDHSAQNQLSSLEDLPLYDYEIYFDYSIEACR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03336 279 Gene3D WRKY domain 104 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g03336 279 ProSiteProfiles WRKY domain profile. 129 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03336 279 Pfam WRKY DNA -binding domain 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo4g03336 279 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo4g03336 279 MobiDBLite consensus disorder prediction 85 103 - -
Pumo4g03336 279 MobiDBLite consensus disorder prediction 85 119 - -
Pumo4g03336 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 33 220 IPR044810 GO:0003700
Pumo4g03336 279 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03336 Pumo-Chr4 70526139 70528700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03336 15 196 WRKY Transcription Factor Family AT3G56400 37.500 1.44e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo4g03336 WRKY 3.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03336 - - gmx:102663281 443.351